Click here to switch to the map view.

The map label for this gene is yiiP [C]

Identifier: 55981009

GI number: 55981009

Start: 987039

End: 987914

Strand: Reverse

Name: yiiP [C]

Synonym: TTHA1040

Alternate gene names: 55981009

Gene position: 987914-987039 (Counterclockwise)

Preceding gene: 55981010

Following gene: 55981008

Centisome position: 53.41

GC content: 71.8

Gene sequence:

>876_bases
ATGGCCGAAGGCGCCGCCCGGTTGAGCCTCGCCGTCGCCCTCCTCGTGTTGGGGCTCAAGGCCCTCGCCTACCTTCTCAC
GGGCTCGGTGGCCCTGCTCTCGGACGCCCTCGAGTCCCTGGTGAACGTGGCCGCGGCCCTCGCCGCCCTCCTCGCCCTCC
GGGTCGCCCGCAAGCCGCCGGACCAGAACCACCCCTTCGGCCACACCAAGGCCGAGTACGTTTCCGCCGTCCTGGAAGGG
GTGCTGGTGGTCTTGGCCGCCCTCTGGATCGCCAAGGAGGCCCTGCCCCGCCTCCTCCACCCCGTGCCCCTCGAGGGCTT
GGGCTTGGGGCTTGGGGTGAGCCTCCTCGCCTCCCTCCTCAACGGCCTCCTGGCCTACCACCTCCTGAAGGAGGGCCGCC
GCCACCGCTCCCCCGCCCTCACCGCCGACGGGTACCACGTCCTCTCCGACGTCCTCACCTCCTTGGGGGTGGTCCTGGGC
GTGGGCCTCGCCGGGCTCACGGGCCTTTGGGTCTTGGACCCCCTCCTCGCCCTCGCCGTGGCGGGCCAGATCCTCTTCCT
GGGCTACCGCATCGTGCGGGAGTCGGTGGGAGGGCTTATGGACGAGGGCCTTCCCCCGGAGGAGGTGGAGCGCATCCACA
CCTTCCTCCAGGAGCGCATCCGGGGCCGGGCCCTCGAGGTCCACGACCTCAAGACCCGAAGGGCCGGCCCCAGGAGCTTC
CTGGAGTTCCACCTCGTGGTGCGGGGGGACACCCCCGTGGAGGAGGCCCACCGCCTCTGCGACGAGCTGGAAAGGGCCCT
GGCCCAGGCCTTTCCCGGCCTTCAGGCCACCATCCACGTGGAGCCCGAGGGCGAGCGGAAGCGGACAAACCCCTGA

Upstream 100 bases:

>100_bases
CCGCCTCGCCATGCTCCTCACCGACCAGCCCTCTCTAAGGGACGTCCTCCTCTTCCCCCTCCTCAAGCCCAAGAAGGAGG
CGGTGGAAGAAGGGGTCTAA

Downstream 100 bases:

>100_bases
CGCTCTTTTCCTGCCCGGCAAAAAAGCGTAAACTATGGGGCAAAGGAGGCCCCCATGCGCAGGAAGCACGACTGGCTCAG
GGAAACCTATAGGAAGAGCC

Product: cation efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAEGAARLSLAVALLVLGLKALAYLLTGSVALLSDALESLVNVAAALAALLALRVARKPPDQNHPFGHTKAEYVSAVLEG
VLVVLAALWIAKEALPRLLHPVPLEGLGLGLGVSLLASLLNGLLAYHLLKEGRRHRSPALTADGYHVLSDVLTSLGVVLG
VGLAGLTGLWVLDPLLALAVAGQILFLGYRIVRESVGGLMDEGLPPEEVERIHTFLQERIRGRALEVHDLKTRRAGPRSF
LEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEGERKRTNP

Sequences:

>Translated_291_residues
MAEGAARLSLAVALLVLGLKALAYLLTGSVALLSDALESLVNVAAALAALLALRVARKPPDQNHPFGHTKAEYVSAVLEG
VLVVLAALWIAKEALPRLLHPVPLEGLGLGLGVSLLASLLNGLLAYHLLKEGRRHRSPALTADGYHVLSDVLTSLGVVLG
VGLAGLTGLWVLDPLLALAVAGQILFLGYRIVRESVGGLMDEGLPPEEVERIHTFLQERIRGRALEVHDLKTRRAGPRSF
LEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEGERKRTNP
>Mature_290_residues
AEGAARLSLAVALLVLGLKALAYLLTGSVALLSDALESLVNVAAALAALLALRVARKPPDQNHPFGHTKAEYVSAVLEGV
LVVLAALWIAKEALPRLLHPVPLEGLGLGLGVSLLASLLNGLLAYHLLKEGRRHRSPALTADGYHVLSDVLTSLGVVLGV
GLAGLTGLWVLDPLLALAVAGQILFLGYRIVRESVGGLMDEGLPPEEVERIHTFLQERIRGRALEVHDLKTRRAGPRSFL
EFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEGERKRTNP

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Homo sapiens, GI57164948, Length=242, Percent_Identity=26.8595041322314, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI1790349, Length=281, Percent_Identity=33.4519572953737, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1786966, Length=261, Percent_Identity=29.8850574712644, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193210990, Length=307, Percent_Identity=25.4071661237785, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 31155; Mature: 31024

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGAARLSLAVALLVLGLKALAYLLTGSVALLSDALESLVNVAAALAALLALRVARKPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DQNHPFGHTKAEYVSAVLEGVLVVLAALWIAKEALPRLLHPVPLEGLGLGLGVSLLASLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NGLLAYHLLKEGRRHRSPALTADGYHVLSDVLTSLGVVLGVGLAGLTGLWVLDPLLALAV
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQILFLGYRIVRESVGGLMDEGLPPEEVERIHTFLQERIRGRALEVHDLKTRRAGPRSF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
LEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEGERKRTNP
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
AEGAARLSLAVALLVLGLKALAYLLTGSVALLSDALESLVNVAAALAALLALRVARKPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DQNHPFGHTKAEYVSAVLEGVLVVLAALWIAKEALPRLLHPVPLEGLGLGLGVSLLASLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NGLLAYHLLKEGRRHRSPALTADGYHVLSDVLTSLGVVLGVGLAGLTGLWVLDPLLALAV
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQILFLGYRIVRESVGGLMDEGLPPEEVERIHTFLQERIRGRALEVHDLKTRRAGPRSF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
LEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEGERKRTNP
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]