Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55980983

Identifier: 55980983

GI number: 55980983

Start: 958574

End: 961255

Strand: Reverse

Name: 55980983

Synonym: TTHA1014

Alternate gene names: NA

Gene position: 961255-958574 (Counterclockwise)

Preceding gene: 55980984

Following gene: 55980982

Centisome position: 51.97

GC content: 67.45

Gene sequence:

>2682_bases
ATGGCGCTTCCGGCGTGGCGAGAAGTGGCACTGCCCCACGAGGACATCCGCCGGGGCAGGTTTGACGAGTCCACCTTTGC
GGCCGATCTGGCCGATGTGCTGGCGGGCCGTGGGCCCTTGGAGTACCGCGACCCTCTCACTTTCTTCCGCAAGACCTATC
CCACCAAGGGGATGGTCCGGCTCCTCGGGGCGGTGGTGCGCCGCCTCTCCGGGGAGAAGGGGGGCGAGCCCGTGGTCCAG
ATCCAGACTCCCTTCGGCGGGGGGAAGACCCACGGCCTCGTGGCCCTCTACCACCTCTTCCGCTCGGGCGAGGAGGCGAG
GGGGACGGAGCTTTACGCCCGGGTCCTCGAGGAGGCGGGCGTGGAGAGGATCCCGGAGGCCAAGGTGGCCGTCTTCGTGG
GCACGGCCGCAGACCCCCTGAAGGGCCGCACCCCTTGGGGGGAGCTTGCCCTCCAGCTTGGGCACTACGGCCTCCTGGAG
GAGCACGACAAGGCCCGCCAGGCCCCGGGGAAGGAGCGGCTATACGAGCTCTTCCGGGCGGCGGGCGGCCCGGTCCTCAT
TCTGATGGACGAGGTGGCGGAGTACGTGGCCCGCACCGTGGACCCCACGGCCTTGCACAAGGAGGGGGGGAGCCTCGAGG
GGGGGCGGGCCTACCAGACCCAGGTGCTCGCCTTCTTCCAGGAGCTCACCGAGGCGGTCAAGGTGGCGCCCCAGGTGGCC
TTGGTCATGACCATTCCCTCCAGCGCCCCCTACGGCGAGGAAGGAGAGCGGGCCCTCCTCCAGCTTCAGCGGATCGCCGG
GCGGTTGGAAGCGATCTACGAGCCCGTTAAGGGCTGGGAGATCTACGACGTCATCCGCACGCGCCTCTTTGAGGGGATTC
GGGACGAGGGGGTGGTCCGGAAGGTGGCCGAACGCTACTTTGAGCTCTATCGCCGCCTGGGGACCGAGGTGCCCGACGAG
GCCCGCGACCCTGCCTACCGGGAGCGCATGCGGAGGGCCTACCCTTTCCATCCCGAGCTCATAGACGCGCTCTACGAGCG
GTGGGGAACCCTTTCCACCTTCCAGCGGACGCGGGGGGTGCTCCGCTTCCTGGCGGAGATCGTGGCCGACCTCTACGGCC
GCGAGCATTCGGCCCCCCTGATCCACTCGGCCCACGTCAACCTGGCGAATCCGAGCATCCGGCGGGAGCTGGTGAAGCAC
ATCGGCAACGAGTTTGACAGCGTGATCGCCGCCGACATCGCCGACCCAGAGGGGCAGGCCAAGGCCCAGCGCTTGGACCG
GGAGATGGGCTCAGAGTACGTCCGCTTCCAGGTGGCCTCCGGGCTCGCCACGGCCATCTTCCTCTACTCCTTCAGCGGCG
GCGAGCGCAAGGGGGCGAGCCCCGCTCAGCTCCGGCTGGCCGCCCTGCGCCCTGAGGTTCCGCCCCCCTTGGTGGGCGAT
GCCCTAGGGCGCCTGCGGGAACTCCTCTGGTATCTGCACGAGGCCTCCGGGCTTTACTACTTCTCCAGCCAGCCCAATCT
CAACCGCATCGTGGTGGAGCGCGAGAACGCCGTTGACCCCGAACAGATCAGGCAGGCGCTAAGGGAGCGGCTTGAGAGGA
TCGCCGGGCGGGAGCTTAGGGTCTACCTCGAGCCCCATTCCCCGCAGGACGTGCCCGACACCAAAGAGCTTAAGCTCGCT
GTTCTCTCGGAGCCCTCCGGGAGTCTCGCCGAGGAGCTTCTGGAGAAGGCGGGCACCACCTTCCGTACCTACAAGAACAC
CCTCTTCCTCCTCTCGCCCGACCCCAACAGCCTAGGGGACCTCCACCGCGCGGCGCGACGCTACCTGGCCTTGCGGTCCA
TACGCGAGGACCGCACCCTCTACGGCCAGCTTTCCGCGGAGAACCGCCACCGCCTGGACGAACTCCTTCGGGAAGCCGAT
GGGGCGCTCACCCAAAAGCTTTTCATGGCCTACCGCCGCCTGACGAAGCCCGGGCGCCAAGGGCCGGAGACCTACGACAT
GGGCATCCCCACCGTGGGGGAGGCCTCCACTCTGGCCAAGCGGGTCTACGAATACTTAAAGGCCCGGGAGTTCCTCTTGG
AGCGCATCGCCCCCCGGCACCTGCTTTCGGCCCTGGCCCAGGGAGAGACGGGGAAGCCCCTCCAAGAGGTATACGAGGCC
TTCCTTCGCTACCCCCACCTTCCGGTCCTGAAGGGTTGGGAGGTCCTCGAGGAGGCGGTGCGGAAGGGGGTGGCGGAGGG
GACGTTCGGACTGCGGGTAGGGGAGCGCTACTACTTCCAGGAGCCCGTGCTCGGGATCGCCTGGGAGGAGGCCTTCCTCG
TCCGCAAGGAGGCCCTTCCTCCCGAGAGGGAATCCGTGGTGGATGGGGAGAAGAAGGGTGAGGCTTCCTCGGAAGGGGTT
GCGCCTAAGCCGGATTCTTCTGAGGAAGAAGTGCCCCCCGATTCCTCGGGGGGAGAGGCTCGGCCAGAGCGGGTGCAGGA
ATACACTGTGAAGGTCCGGCTCCCCTGGAACAGGCTTTCCGACTTCCTGCGCGGGGTCTTAATGCCCTTGCAGAGGGAAG
GTGCGGAGATGGAGCTCCAGATAGAGCTTAGAGCCCGCTCCCAGGAGGGGATTCCCCGGGCCACCTTGGACAAGATACGG
GAGACGCTGGACCAGCTGCAGGCCAAGGTAGAGGAAGCCTGA

Upstream 100 bases:

>100_bases
TGTTGGACTTCACCCGCAGATCGAGAAGGTGCTCGCCGAGGAAAGGGCGAGGGAGCGTCCCAAGCGTGAGAAAGACCGGG
AGAAAGGAGGAATGAGGCCA

Downstream 100 bases:

>100_bases
TCGGGGGGAGCGTCCCCCACCCCTGGGCCTTGCGGTGCGGTATCCTGGTAGACGTGCGTACCCTCAAGGTACAGGCCCTG
TGGGATGGGGAAGCCGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase-Like Protein; ATPase; Cytoplasmic Protein; ATPase Of AAA+ Class; Protein Kinase ATPase

Number of amino acids: Translated: 893; Mature: 892

Protein sequence:

>893_residues
MALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVRLLGAVVRRLSGEKGGEPVVQ
IQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAGVERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLE
EHDKARQAPGKERLYELFRAAGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA
LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVRKVAERYFELYRRLGTEVPDE
ARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGVLRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKH
IGNEFDSVIAADIADPEGQAKAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD
ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELRVYLEPHSPQDVPDTKELKLA
VLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGDLHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREAD
GALTQKLFMAYRRLTKPGRQGPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA
FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALPPERESVVDGEKKGEASSEGV
APKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLSDFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIR
ETLDQLQAKVEEA

Sequences:

>Translated_893_residues
MALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVRLLGAVVRRLSGEKGGEPVVQ
IQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAGVERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLE
EHDKARQAPGKERLYELFRAAGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA
LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVRKVAERYFELYRRLGTEVPDE
ARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGVLRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKH
IGNEFDSVIAADIADPEGQAKAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD
ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELRVYLEPHSPQDVPDTKELKLA
VLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGDLHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREAD
GALTQKLFMAYRRLTKPGRQGPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA
FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALPPERESVVDGEKKGEASSEGV
APKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLSDFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIR
ETLDQLQAKVEEA
>Mature_892_residues
ALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVRLLGAVVRRLSGEKGGEPVVQI
QTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAGVERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLEE
HDKARQAPGKERLYELFRAAGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVAL
VMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVRKVAERYFELYRRLGTEVPDEA
RDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGVLRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKHI
GNEFDSVIAADIADPEGQAKAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGDA
LGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELRVYLEPHSPQDVPDTKELKLAV
LSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGDLHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREADG
ALTQKLFMAYRRLTKPGRQGPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEAF
LRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALPPERESVVDGEKKGEASSEGVA
PKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLSDFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIRE
TLDQLQAKVEEA

Specific function: Unknown

COG id: COG1483

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100500; Mature: 100368

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVR
CCCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHH
LLGAVVRRLSGEKGGEPVVQIQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAG
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
VERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLEEHDKARQAPGKERLYELFRA
HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH
AGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA
CCCCEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVR
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH
KVAERYFELYRRLGTEVPDEARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGV
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKHIGNEFDSVIAADIADPEGQA
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHH
ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELR
HHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEE
VYLEPHSPQDVPDTKELKLAVLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGD
EEECCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHH
LHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREADGALTQKLFMAYRRLTKPGRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHH
FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALP
HHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCHHHHHCCCHHHHHHHHHHHHHHCCC
PERESVVDGEKKGEASSEGVAPKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLS
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCHHHHH
DFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIRETLDQLQAKVEEA
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVR
CCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHH
LLGAVVRRLSGEKGGEPVVQIQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAG
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
VERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLEEHDKARQAPGKERLYELFRA
HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH
AGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA
CCCCEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVR
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH
KVAERYFELYRRLGTEVPDEARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGV
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKHIGNEFDSVIAADIADPEGQA
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHH
ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELR
HHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEE
VYLEPHSPQDVPDTKELKLAVLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGD
EEECCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHH
LHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREADGALTQKLFMAYRRLTKPGRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHH
FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALP
HHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCHHHHHCCCHHHHHHHHHHHHHHCCC
PERESVVDGEKKGEASSEGVAPKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLS
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCHHHHH
DFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIRETLDQLQAKVEEA
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA