Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980968

Identifier: 55980968

GI number: 55980968

Start: 944934

End: 947144

Strand: Reverse

Name: 55980968

Synonym: TTHA0999

Alternate gene names: NA

Gene position: 947144-944934 (Counterclockwise)

Preceding gene: 55980969

Following gene: 55980967

Centisome position: 51.2

GC content: 73.41

Gene sequence:

>2211_bases
ATGAAGCCCGGCCTCCATATCGTCCAGGGGCCGCCCGCCTCGGGGAAGACCCGTCTGGCGCTGGCGTGGGCCCTGGAGGT
CCTTGGGAGGCGGGGCCGCGTCTTCTGGGTGGGGCTTCCCCACCAGCGGGCCTATGTCTACCGGCTGCTTTCGGAGGAAG
GGGCCTTTTTGGGCCTGGAGTTCCTCTCCTTCCAGGCCCTCTACTACCGGGTTTTGGCCGAGGCGGGGTGGCTTAAGCCC
CTCCTTCCCGGAGCGGGGCGGGTGGCCCTGGTGGGGGAGGCCTTGCGCCGGGCCGGGGAGGGGCCCGTGGCCCCGGGGGA
GGCCCGGCTCTTCGCCCGGGCCATCGCCGAGCTGAAGCGGTACGGGATCTCCCCCTTCGCCCTGCCCAAGGAGGGGGAGG
CCGGGCGGCTTAGGCGGGTCTACCGCCTCTACGAGCGCCTGAAGGCGGGAAGCCTGGACTACGACGACTTCCGGCACCGG
GCCCTAAAAGCCCCCTTGCGCCTCTTCCCCTGGCCCGACCTCGTGGTGGTGGACGGGTTCCGGGAGGTGGGGCCTTTGGA
CCTCCGCTTCCTCCGGCGGCTTTCCGAACGGGTTCCCGTCCTCCTTACCCTGGAGGTGCTCCCCGAGGGGTGCACCCCCC
ACCGCGTCCTCGAGGCCCGGCCGGTCGCCCGCCGGGTCTTCCGCCTCGCCAACCCCGTGGAGGAGGCCCGCTACCTCCTC
CGGGCCCTGAAGCGGGCCTTGGCGCCAAAGGCGCTCGGGGGGGAGGGGCTTGCCCCGGAGGACGTTCTCGTGGTGGCCCC
GCCGGAGCGCATCGGGGGACTCATGCTCCTTAAGGACGAATACGGCCTTCCCCTCGAGGACGGCCGGGAGCGCGCCCTGG
CGGAGACGGAAGAAGGGGAGCGGGTCTTCGCCCTCCTCAACCCCTTCCCCACGGGGCGGGACCTCCTTGCCCTGGGCTTT
TCCGCTTTGGGGCGCAAGGCGCTGAGGCTCGGGCTTGCCGGGGAGGAGGCCCTAAGGGCCTTGGCGGAGCGGGAGGGTTT
GGAGGCGGAGTGGGAGGCCTTCCTGCGCCTGCGCACCCCGGGCCCCGACCTCGAGGCCTGGGCCGAGGCGGCCTTGGAGG
CCTTGGGGGTGGAGGCCAAGGAGGTCTTCCTCTCCCGCTTCCGCATGGCCCTCCGGGTGGACCGGGGCGAGCCTTTGGCC
TGGTGGCGGAGCCTCCTCCTGGACGAGGTTCTGCCCCCGGAGGTGGGCCGGGGCGTGGCCGTCCTCCCCCCCTTGAGGGC
CACGGGGGTGCGGGCCCGGAGGGCCTACGTGCTGGAGTGGGTGGCGGGCCGGTACACCCTGGGGGAGCGGGAGGACTACT
TCCTCCTGGAGGACCTGCGGGAGCAGGGCCTCCTGAAGGGCCTTCCCCGGCGGCTTCGCGGGCTTGACCCCTTGTTTTTG
GAGGAGCTTTCCACCCGGGGGGAGGAGGTGGTCCTCCTCTACCCCGAGGCCGGGCCCGGGGGGCCTGTGGAGCCCTTGGC
GGCGGGGGAGCGGCCCGAGGCCCTGCCCCCGGCGAGCCGCCTCGAGGCCCTGCCCCAGGCCCCCTTCCGCCCCGCCCACC
CCACCTCGCCCGCCTCCCCGCCCCACGTGGAGGCCCTCCGCCGCTATTTGGAGTGTCCCTTTAGGGCTTACCTGGAGCGC
TACCCCCTCCGGGACGGGGAGGAAAGCCCCTGGCGCGCCCTGCCTTCCCCCGTGGACCTGGGGGCCTTGGGGGGGCTTTT
CGCCGACGGGCGGGTGGGGCCCTGGCTTCGCGCCCACGGGGCCCACCTCCAGGGCCTGAGGCTTTACGTCCTCTGGCCCG
GGCGGCGCTACCGGCTCCGCCTGGACGGGGTGCGGTGGGAGGGGCGGGCGGTCCACCTCTACCGCCTCTTGGGCGAGGGG
GCCGAGCCCGACCTGAGCCCCAAGCGGCGCTGGACGGAGTGGCTCGCCCTCAAGGCCCTCCTTCAGCGGGAGGACGTGGA
GGCCGTTCACCTTTGGGCCTGGCCCTGGCTGGGCAGGCCCAGGCCCGTGGGGAAGGGGGTTTACCGCAAGGGGGATGCGC
TTCCCGCCCTCAAGGAGGTGGAGCCCCTTCTGGAGAAGGCCCTCCGGTCCTGGGGCGCCTTTCCCCCGAGGCCCGGGCCC
CACTGCCACGCCTGCGGCCTCGCCGACCTTTGCCGGAAGGAGGAGGAGTGA

Upstream 100 bases:

>100_bases
TCGGCCTAGGGGGCCTCCTCTTCCTCGCCCTCGCCCTCTACGCCGCCCGCTAAGTTCCCCACCGCGGCTTCCGCCGGGGG
CCGGGTAGAATGGAGCCGCT

Downstream 100 bases:

>100_bases
AGCTCTACGTGGCCTCGGCGGGCACGGGGAAGACCCATACCCTGGTGGAGGAGCTTTTGGCCCTGGTGAAGGGGGGTGTG
CCCCTGCGGCGCATCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 736; Mature: 736

Protein sequence:

>736_residues
MKPGLHIVQGPPASGKTRLALAWALEVLGRRGRVFWVGLPHQRAYVYRLLSEEGAFLGLEFLSFQALYYRVLAEAGWLKP
LLPGAGRVALVGEALRRAGEGPVAPGEARLFARAIAELKRYGISPFALPKEGEAGRLRRVYRLYERLKAGSLDYDDFRHR
ALKAPLRLFPWPDLVVVDGFREVGPLDLRFLRRLSERVPVLLTLEVLPEGCTPHRVLEARPVARRVFRLANPVEEARYLL
RALKRALAPKALGGEGLAPEDVLVVAPPERIGGLMLLKDEYGLPLEDGRERALAETEEGERVFALLNPFPTGRDLLALGF
SALGRKALRLGLAGEEALRALAEREGLEAEWEAFLRLRTPGPDLEAWAEAALEALGVEAKEVFLSRFRMALRVDRGEPLA
WWRSLLLDEVLPPEVGRGVAVLPPLRATGVRARRAYVLEWVAGRYTLGEREDYFLLEDLREQGLLKGLPRRLRGLDPLFL
EELSTRGEEVVLLYPEAGPGGPVEPLAAGERPEALPPASRLEALPQAPFRPAHPTSPASPPHVEALRRYLECPFRAYLER
YPLRDGEESPWRALPSPVDLGALGGLFADGRVGPWLRAHGAHLQGLRLYVLWPGRRYRLRLDGVRWEGRAVHLYRLLGEG
AEPDLSPKRRWTEWLALKALLQREDVEAVHLWAWPWLGRPRPVGKGVYRKGDALPALKEVEPLLEKALRSWGAFPPRPGP
HCHACGLADLCRKEEE

Sequences:

>Translated_736_residues
MKPGLHIVQGPPASGKTRLALAWALEVLGRRGRVFWVGLPHQRAYVYRLLSEEGAFLGLEFLSFQALYYRVLAEAGWLKP
LLPGAGRVALVGEALRRAGEGPVAPGEARLFARAIAELKRYGISPFALPKEGEAGRLRRVYRLYERLKAGSLDYDDFRHR
ALKAPLRLFPWPDLVVVDGFREVGPLDLRFLRRLSERVPVLLTLEVLPEGCTPHRVLEARPVARRVFRLANPVEEARYLL
RALKRALAPKALGGEGLAPEDVLVVAPPERIGGLMLLKDEYGLPLEDGRERALAETEEGERVFALLNPFPTGRDLLALGF
SALGRKALRLGLAGEEALRALAEREGLEAEWEAFLRLRTPGPDLEAWAEAALEALGVEAKEVFLSRFRMALRVDRGEPLA
WWRSLLLDEVLPPEVGRGVAVLPPLRATGVRARRAYVLEWVAGRYTLGEREDYFLLEDLREQGLLKGLPRRLRGLDPLFL
EELSTRGEEVVLLYPEAGPGGPVEPLAAGERPEALPPASRLEALPQAPFRPAHPTSPASPPHVEALRRYLECPFRAYLER
YPLRDGEESPWRALPSPVDLGALGGLFADGRVGPWLRAHGAHLQGLRLYVLWPGRRYRLRLDGVRWEGRAVHLYRLLGEG
AEPDLSPKRRWTEWLALKALLQREDVEAVHLWAWPWLGRPRPVGKGVYRKGDALPALKEVEPLLEKALRSWGAFPPRPGP
HCHACGLADLCRKEEE
>Mature_736_residues
MKPGLHIVQGPPASGKTRLALAWALEVLGRRGRVFWVGLPHQRAYVYRLLSEEGAFLGLEFLSFQALYYRVLAEAGWLKP
LLPGAGRVALVGEALRRAGEGPVAPGEARLFARAIAELKRYGISPFALPKEGEAGRLRRVYRLYERLKAGSLDYDDFRHR
ALKAPLRLFPWPDLVVVDGFREVGPLDLRFLRRLSERVPVLLTLEVLPEGCTPHRVLEARPVARRVFRLANPVEEARYLL
RALKRALAPKALGGEGLAPEDVLVVAPPERIGGLMLLKDEYGLPLEDGRERALAETEEGERVFALLNPFPTGRDLLALGF
SALGRKALRLGLAGEEALRALAEREGLEAEWEAFLRLRTPGPDLEAWAEAALEALGVEAKEVFLSRFRMALRVDRGEPLA
WWRSLLLDEVLPPEVGRGVAVLPPLRATGVRARRAYVLEWVAGRYTLGEREDYFLLEDLREQGLLKGLPRRLRGLDPLFL
EELSTRGEEVVLLYPEAGPGGPVEPLAAGERPEALPPASRLEALPQAPFRPAHPTSPASPPHVEALRRYLECPFRAYLER
YPLRDGEESPWRALPSPVDLGALGGLFADGRVGPWLRAHGAHLQGLRLYVLWPGRRYRLRLDGVRWEGRAVHLYRLLGEG
AEPDLSPKRRWTEWLALKALLQREDVEAVHLWAWPWLGRPRPVGKGVYRKGDALPALKEVEPLLEKALRSWGAFPPRPGP
HCHACGLADLCRKEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82343; Mature: 82343

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGLHIVQGPPASGKTRLALAWALEVLGRRGRVFWVGLPHQRAYVYRLLSEEGAFLGLE
CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEHHH
FLSFQALYYRVLAEAGWLKPLLPGAGRVALVGEALRRAGEGPVAPGEARLFARAIAELKR
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
YGISPFALPKEGEAGRLRRVYRLYERLKAGSLDYDDFRHRALKAPLRLFPWPDLVVVDGF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCEEEECCC
REVGPLDLRFLRRLSERVPVLLTLEVLPEGCTPHRVLEARPVARRVFRLANPVEEARYLL
HHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHH
RALKRALAPKALGGEGLAPEDVLVVAPPERIGGLMLLKDEYGLPLEDGRERALAETEEGE
HHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCEEEEECCCCCCCCCCHHHHHHCCCCCC
RVFALLNPFPTGRDLLALGFSALGRKALRLGLAGEEALRALAEREGLEAEWEAFLRLRTP
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHEEECCC
GPDLEAWAEAALEALGVEAKEVFLSRFRMALRVDRGEPLAWWRSLLLDEVLPPEVGRGVA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEE
VLPPLRATGVRARRAYVLEWVAGRYTLGEREDYFLLEDLREQGLLKGLPRRLRGLDPLFL
ECCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EELSTRGEEVVLLYPEAGPGGPVEPLAAGERPEALPPASRLEALPQAPFRPAHPTSPASP
HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PHVEALRRYLECPFRAYLERYPLRDGEESPWRALPSPVDLGALGGLFADGRVGPWLRAHG
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCHHHHCC
AHLQGLRLYVLWPGRRYRLRLDGVRWEGRAVHLYRLLGEGAEPDLSPKRRWTEWLALKAL
CCCCCEEEEEEECCCEEEEEECCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LQREDVEAVHLWAWPWLGRPRPVGKGVYRKGDALPALKEVEPLLEKALRSWGAFPPRPGP
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
HCHACGLADLCRKEEE
CCCCCCHHHHHHCCCC
>Mature Secondary Structure
MKPGLHIVQGPPASGKTRLALAWALEVLGRRGRVFWVGLPHQRAYVYRLLSEEGAFLGLE
CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEHHH
FLSFQALYYRVLAEAGWLKPLLPGAGRVALVGEALRRAGEGPVAPGEARLFARAIAELKR
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
YGISPFALPKEGEAGRLRRVYRLYERLKAGSLDYDDFRHRALKAPLRLFPWPDLVVVDGF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCEEEECCC
REVGPLDLRFLRRLSERVPVLLTLEVLPEGCTPHRVLEARPVARRVFRLANPVEEARYLL
HHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHH
RALKRALAPKALGGEGLAPEDVLVVAPPERIGGLMLLKDEYGLPLEDGRERALAETEEGE
HHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCEEEEECCCCCCCCCCHHHHHHCCCCCC
RVFALLNPFPTGRDLLALGFSALGRKALRLGLAGEEALRALAEREGLEAEWEAFLRLRTP
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHEEECCC
GPDLEAWAEAALEALGVEAKEVFLSRFRMALRVDRGEPLAWWRSLLLDEVLPPEVGRGVA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEE
VLPPLRATGVRARRAYVLEWVAGRYTLGEREDYFLLEDLREQGLLKGLPRRLRGLDPLFL
ECCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EELSTRGEEVVLLYPEAGPGGPVEPLAAGERPEALPPASRLEALPQAPFRPAHPTSPASP
HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PHVEALRRYLECPFRAYLERYPLRDGEESPWRALPSPVDLGALGGLFADGRVGPWLRAHG
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCHHHHCC
AHLQGLRLYVLWPGRRYRLRLDGVRWEGRAVHLYRLLGEGAEPDLSPKRRWTEWLALKAL
CCCCCEEEEEEECCCEEEEEECCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LQREDVEAVHLWAWPWLGRPRPVGKGVYRKGDALPALKEVEPLLEKALRSWGAFPPRPGP
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
HCHACGLADLCRKEEE
CCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA