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The map label for this gene is ycdH [C]

Identifier: 55980930

GI number: 55980930

Start: 907710

End: 908159

Strand: Direct

Name: ycdH [C]

Synonym: TTHA0961

Alternate gene names: 55980930

Gene position: 907710-908159 (Clockwise)

Preceding gene: 55980929

Following gene: 55980931

Centisome position: 49.07

GC content: 70.0

Gene sequence:

>450_bases
GTGAAAGAGGCCTTCAAGGAGGCCCTCGCCCGCTTCGCCAGCGGGGTCACGGTGGTGGCGGCCAGGCTTGGGGAGGAGGA
AAGGGGGATGACGGCCACCGCCTTCATGTCCCTAAGCCTCGAGCCCCCCCTCGTGGCCCTGGCGGTGAGCGAACGGGCCA
AGCTCCTCCCCGTCCTCGAGGGGGCGGGGGCCTTCACCGTAAGCCTCCTCCGCGAGGGGCAGGAGGCGGTCTCCGAGCAC
TTCGCGGGAAGGCCCAAGGAGGGAATCGCCCTGGAGGAGGGGAGGGTGAAGGGGGCCCTCGCCGTCCTCCGCTGCCGCCT
CCACGCCCTCTACCCCGGGGGGGACCACCGGATCGTGGTGGGCCTGGTGGAGGAGGTGGAGCTCGGGGAGGAGGGGCCTC
CTTTGGTCTACTTCCAAAGGGGCTACAGGAGGTTGGTATGGCCATCGTGA

Upstream 100 bases:

>100_bases
TGTACCAGACCCTCTACAACGTCTACAACAAGGAGCCCTACAAGGAGAGGATCCGCGCTTTCCTCAAGGAAAGCCTCAAG
GTCTTTGAGGAGGTCCAGGC

Downstream 100 bases:

>100_bases
GGGTGGGGTTTGTGGAACTTTGGGTGCGGGACCTGGAGAAGAGCCTGGAGTTCTACCAGGGGCTTCTGGGCTTCCGCCTG
GAGCACCGGGAGAAGAAGGC

Product: hypothetical protein

Products: NAD(+); reduced flavin [C]

Alternate protein names: 4-HPA 3-monooxygenase small component; Flavin:NADH reductase

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKEAFKEALARFASGVTVVAARLGEEERGMTATAFMSLSLEPPLVALAVSERAKLLPVLEGAGAFTVSLLREGQEAVSEH
FAGRPKEGIALEEGRVKGALAVLRCRLHALYPGGDHRIVVGLVEEVELGEEGPPLVYFQRGYRRLVWPS

Sequences:

>Translated_149_residues
MKEAFKEALARFASGVTVVAARLGEEERGMTATAFMSLSLEPPLVALAVSERAKLLPVLEGAGAFTVSLLREGQEAVSEH
FAGRPKEGIALEEGRVKGALAVLRCRLHALYPGGDHRIVVGLVEEVELGEEGPPLVYFQRGYRRLVWPS
>Mature_149_residues
MKEAFKEALARFASGVTVVAARLGEEERGMTATAFMSLSLEPPLVALAVSERAKLLPVLEGAGAFTVSLLREGQEAVSEH
FAGRPKEGIALEEGRVKGALAVLRCRLHALYPGGDHRIVVGLVEEVELGEEGPPLVYFQRGYRRLVWPS

Specific function: Catalyzes the reduction of free flavins (FMN, FAD and riboflavin) by NADH. Subsequently, the reduced flavins diffuse to the large hpaB component

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. HpaC subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HPAC_THET8 (Q5SJP7)

Other databases:

- EMBL:   AP008226
- RefSeq:   YP_144227.1
- PDB:   2ECR
- PDB:   2ECU
- PDB:   2ED4
- PDBsum:   2ECR
- PDBsum:   2ECU
- PDBsum:   2ED4
- ProteinModelPortal:   Q5SJP7
- SMR:   Q5SJP7
- STRING:   Q5SJP7
- GeneID:   3170068
- GenomeReviews:   AP008226_GR
- KEGG:   ttj:TTHA0961
- NMPDR:   fig|300852.3.peg.1074
- eggNOG:   COG1853
- HOGENOM:   HBG730363
- OMA:   CRVERAD
- ProtClustDB:   CLSK738231
- BioCyc:   TTHE300852:TTHA0961-MONOMER
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002
- Gene3D:   G3DSA:2.30.110.10
- SMART:   SM00903

Pfam domain/function: PF01613 Flavin_Reduct; SSF50475 FMN_binding

EC number: 1.6.8.- [C]

Molecular weight: Translated: 16111; Mature: 16111

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: BINDING 37-37 BINDING 116-116

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAFKEALARFASGVTVVAARLGEEERGMTATAFMSLSLEPPLVALAVSERAKLLPVLE
CHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEHEEEECCCCCEEEEEECCCHHCCHHCC
GAGAFTVSLLREGQEAVSEHFAGRPKEGIALEEGRVKGALAVLRCRLHALYPGGDHRIVV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCEEEE
GLVEEVELGEEGPPLVYFQRGYRRLVWPS
EEEHHHHCCCCCCCEEEEECCCEECCCCC
>Mature Secondary Structure
MKEAFKEALARFASGVTVVAARLGEEERGMTATAFMSLSLEPPLVALAVSERAKLLPVLE
CHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEHEEEECCCCCEEEEEECCCHHCCHHCC
GAGAFTVSLLREGQEAVSEHFAGRPKEGIALEEGRVKGALAVLRCRLHALYPGGDHRIVV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCEEEE
GLVEEVELGEEGPPLVYFQRGYRRLVWPS
EEEHHHHCCCCCCCEEEEECCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; flavin [C]

Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA