| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980929
Identifier: 55980929
GI number: 55980929
Start: 906268
End: 907713
Strand: Direct
Name: 55980929
Synonym: TTHA0960
Alternate gene names: NA
Gene position: 906268-907713 (Clockwise)
Preceding gene: 55980928
Following gene: 55980930
Centisome position: 48.99
GC content: 66.87
Gene sequence:
>1446_bases ATGGCAAGGACCGGAGCGGAGTACATCGAGGCCTTGAAGACCCGTCCCCCCAACCTCTGGTACAAGGGGGAGAAGGTGGA GGACCCCACCACCCACCCCGTCTTCCGGGGGATCGTGCGCACCATGGCCGCCCTCTACGACCTGCAGCACGACCCCCGCT ACCGGGAGGTCCTCACCTACGAGGAGGAGGGGAAGCGGCACGGGATGAGCTTCCTCATCCCCAAGACCAAGGAGGACCTG AAGCGGAGGGGGCAGGCCTACAAGCTCTGGGCCGACCAGAACCTGGGGATGATGGGGCGGAGCCCCGACTACCTCAACGC CGTGGTCATGGCCTACGCGGCGAGCGCGGACTACTTCGGAGAGTTCGCCGAGAACGTCCGGAACTACTACCGGTACCTCC GGGACCAGGACCTCGCCACCACCCACGCCCTCACCAACCCCCAGGTGAACCGGGCGAGGCCTCCCTCGGGCCAGCCCGAC CCCTACATCCCCGTGGGGGTGGTGAAGCAGACGGAGAAGGGGATCGTGGTCCGGGGGGCCCGGATGACGGCCACCTTCCC CCTGGCGGACGAGGTCCTCATCTTCCCCTCCACCCTCCTCCAGGCGGGAAGCGAGAAGTACGCCCTGGCCTTCGCCCTTC CCACCTCCACCCCGGGCCTCCACTTCGTCTGCCGGGAGGCCCTGGTGGGCGGGGACAGCCCCTTTGACCACCCCCTCTCC AGCCGGGTGGAGGAGATGGACTGCCTGGTGATCTTTGACGACGTCCTCGTCCCCTGGGAGAGGGTCTTCATCCTGGGGAA CGTGGAGCTCTGCAACAACGCCTACGCGGCCACGGGCGCCCTGAACCACATGGCCCACCAGGTGGTGGCCCTGAAGACGG CGAAGACCGAGGCCTTCCTTGGGGTGGCGGCCCTCATGGCCGAGGGCATCGGGGCGGACGTCTACGGCCACGTGCAGGAG AAGATCGCCGAGATCATCGTCTACCTCGAGGCCATGCGCGCCTTCTGGACGAGGGCGGAGGAGGAGGCCAAGGAGAACGC CTACGGCCTCTTGGTCCCGGACCGGGGCGCCTTGGACGGGGCCAGGAACCTCTACCCGAGGCTTTACCCCAGGATCCGGG AGATCCTTGAGCAGATCGGGGCTTCCGGCCTCATCACCCTCCCCTCGGAGAAGGACTTCAAGGGGCCCCTCGGCCCCTTC CTGGAGAAGTTCCTCCAGGGGGCGGCCCTCGAGGCCAAGGAGCGGGTGGCCCTCTTCCGCCTGGCCTGGGACATGACCCT CTCCGGCTTCGGGGCGAGGCAGGAGCTCTACGAGCGCTTCTTCTTCGGCGACCCCGTGCGCATGTACCAGACCCTCTACA ACGTCTACAACAAGGAGCCCTACAAGGAGAGGATCCGCGCTTTCCTCAAGGAAAGCCTCAAGGTCTTTGAGGAGGTCCAG GCGTGA
Upstream 100 bases:
>100_bases CGGCACCTATGCCCTGGACTTCTACACCGACCTCAAGACCATCGCCCTTCCCCTCCGCCCCCCGCACGTGCCCAAGTTCG GGAAGTAAGGGAGGTAGCCC
Downstream 100 bases:
>100_bases AAGAGGCCTTCAAGGAGGCCCTCGCCCGCTTCGCCAGCGGGGTCACGGTGGTGGCGGCCAGGCTTGGGGAGGAGGAAAGG GGGATGACGGCCACCGCCTT
Product: 4-hydroxyphenylacetate-3-hydroxylase
Products: NA
Alternate protein names: 4-HPA 3-hydroxylase; 4-HPA 3-monooxygenase large component
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTYEEEGKRHGMSFLIPKTKEDL KRRGQAYKLWADQNLGMMGRSPDYLNAVVMAYAASADYFGEFAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPD PYIPVGVVKQTEKGIVVRGARMTATFPLADEVLIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLS SRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFLGVAALMAEGIGADVYGHVQE KIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPF LEKFLQGAALEAKERVALFRLAWDMTLSGFGARQELYERFFFGDPVRMYQTLYNVYNKEPYKERIRAFLKESLKVFEEVQ A
Sequences:
>Translated_481_residues MARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTYEEEGKRHGMSFLIPKTKEDL KRRGQAYKLWADQNLGMMGRSPDYLNAVVMAYAASADYFGEFAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPD PYIPVGVVKQTEKGIVVRGARMTATFPLADEVLIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLS SRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFLGVAALMAEGIGADVYGHVQE KIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPF LEKFLQGAALEAKERVALFRLAWDMTLSGFGARQELYERFFFGDPVRMYQTLYNVYNKEPYKERIRAFLKESLKVFEEVQ A >Mature_480_residues ARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTYEEEGKRHGMSFLIPKTKEDLK RRGQAYKLWADQNLGMMGRSPDYLNAVVMAYAASADYFGEFAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDP YIPVGVVKQTEKGIVVRGARMTATFPLADEVLIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSS RVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFLGVAALMAEGIGADVYGHVQEK IAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPFL EKFLQGAALEAKERVALFRLAWDMTLSGFGARQELYERFFFGDPVRMYQTLYNVYNKEPYKERIRAFLKESLKVFEEVQA
Specific function: Utilizes FADH(2) supplied by hpaC, to catalyze the hydroxylation of 4-hydroxyphenylacetic acid, leading to the production of 3,4-dihydroxyphenylacetic acid (DHPA)
COG id: COG2368
COG function: function code Q; Aromatic ring hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FADH(2)-utilizing monooxygenase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HPAB_THET8 (Q5SJP8)
Other databases:
- EMBL: AP008226 - RefSeq: YP_144226.1 - PDB: 2YYG - PDB: 2YYI - PDB: 2YYJ - PDB: 2YYK - PDB: 2YYL - PDB: 2YYM - PDBsum: 2YYG - PDBsum: 2YYI - PDBsum: 2YYJ - PDBsum: 2YYK - PDBsum: 2YYL - PDBsum: 2YYM - ProteinModelPortal: Q5SJP8 - SMR: Q5SJP8 - STRING: Q5SJP8 - GeneID: 3170066 - GenomeReviews: AP008226_GR - KEGG: ttj:TTHA0960 - NMPDR: fig|300852.3.peg.1073 - eggNOG: COG2368 - HOGENOM: HBG366849 - OMA: DISLTHT - ProtClustDB: CLSK2761911 - BioCyc: TTHE300852:TTHA0960-MONOMER - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR009100 - InterPro: IPR004925 - InterPro: IPR012687 - Gene3D: G3DSA:2.40.110.10 - Gene3D: G3DSA:1.20.140.10 - PIRSF: PIRSF000331 - TIGRFAMs: TIGR02309
Pfam domain/function: PF03241 HpaB; SSF56645 AcylCoA_dehyd_NM; SSF47203 AcylCoADH_C_like
EC number: NA
Molecular weight: Translated: 54304; Mature: 54173
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: BINDING 142-142 BINDING 185-185
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTY CCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCC EEEGKRHGMSFLIPKTKEDLKRRGQAYKLWADQNLGMMGRSPDYLNAVVMAYAASADYFG HHHHHHCCCEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHH EFAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPYIPVGVVKQTEKGIVVRGA HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCEEEECC RMTATFPLADEVLIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLS EEEEECCCCCCHHCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHH SRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFL HHHHHCCEEEEEHHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVAALMAEGIGADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC ARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPFLEKFLQGAALEAKERVALFR HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH LAWDMTLSGFGARQELYERFFFGDPVRMYQTLYNVYNKEPYKERIRAFLKESLKVFEEVQ HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure ARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTY CCCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCC EEEGKRHGMSFLIPKTKEDLKRRGQAYKLWADQNLGMMGRSPDYLNAVVMAYAASADYFG HHHHHHCCCEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHH EFAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPYIPVGVVKQTEKGIVVRGA HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCEEEECC RMTATFPLADEVLIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLS EEEEECCCCCCHHCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHH SRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFL HHHHHCCEEEEEHHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVAALMAEGIGADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC ARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPFLEKFLQGAALEAKERVALFR HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH LAWDMTLSGFGARQELYERFFFGDPVRMYQTLYNVYNKEPYKERIRAFLKESLKVFEEVQ HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA