| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is purH [H]
Identifier: 55980899
GI number: 55980899
Start: 879571
End: 881070
Strand: Direct
Name: purH [H]
Synonym: TTHA0930
Alternate gene names: 55980899
Gene position: 879571-881070 (Clockwise)
Preceding gene: 55980898
Following gene: 55980904
Centisome position: 47.55
GC content: 71.0
Gene sequence:
>1500_bases ATGCGGTCTATGTGGGCCCTTCTTTCCGTCGCGGACAAGCGGGGGATCGTGGACTTCGCCCGGGGGCTTGCGGAGCTTGG CTTCCGCCTCCTCGCCACGGGGGGGACCTACCGCGCCCTCCGCGAGGCGGGGCTTCCCGTGACCTACATCTCCGACTTCA CCGGCTTTCCCGAGATCCTGGAGGGGAGGGTCAAGACCCTCCACCCCAAGGTGCACGCCGCCCTCCTCGCCCGCCCGGAC CAGGAGGAGGAGCTTAAGGCCTTGGGGTTGGAGCGCATCGGGGTCTTGGCGGTGAACCTCTACCCCTTCCGGGAGACGGT GGCCCGGGGGGCCTCCTTTGCGGAGGCCCTGGAGCAGATTGACATCGGGGGCCCCGCCATGCTCCGGGCGGCGGCCAAGA ACCACCAGGCGGTGCTTCCCGTGTGCGACCCCGAGGACTACCCCCGGGTCCTGGAGGCGCTCAAGGCGGGGCCCTCCCCG GACTTCCGCCAAAAGCTCGCCCGCAAGGCCTTCGCCCACACCGCCCTCTACGACGCCGCCATCGCCGAGTGGCTTTCCGG GGAGAAGTTCCCCGAGGAGAAGCTTTTGGCCCTCAGGCGGGAGGCCTCCTTGCGTTACGGGGAGAACCCCCACCAGGAGG CGGCCCTCTACCGGGTGGTGGGGGAGAGGGGGCCTCTGCTCGAGGCCCAGGTGCTTCAGGGGAAGGCCATGAGCTTCAAC AACTACCTGGACGCCGAGGCCGCCTGGAACCTGGTGTCCGAGTTCGCCGAGCCCGCCTGCGTGGCCGTGAAGCACCAGAA CCCCTGCGGCGTGGCCCTGGGGGAGACCCCCCTGGAGGCCTACCGGAAGGCCTACGAGGCCGACCCCGTCTCCATCTTCG GCGGCATCGTGGCCTTCAACCGCCCCCTGGACGGCCCCACGGCGGAGGCCCTGGCGGAGGTCTTCCTGGAGGTGGTCCTC GCCCCCTCCTTTAGCCCCGAGGCCCGGGCGGTCCTCGCCAGGAAGAAGAACCTCCGCCTCCTCCAGGTGCCCTTCCCTGC CCAAGGGCCCTACCTGGACCTGAGGCGCCTCCGGGGCGGGGTGCTCCTCCAGGACGCGGACACCGAGGACCCCGCGGAGC CCAAGGTGGTCACGGAGAGGGCCCCCACCCCGGAGGAGTGGCCCGACCTCCGCTTCGCCTGGAAGGTGGTGAAGCACGTG CGCTCCAATGCCATCGTGGTGGCCAAGGGGGGGATGACCCTGGGGATCGGGGTGGGGCAGACGAACCGCCTCGCCGCCGC CCGGCACGCCCTGGAGGCGGCCGGGGAAAGGGCCAAGGGCGCCGTCCTGGCCTCCGACGCCTTCTTCCCCTTTGACGACG TGGTCCGCCTCGCCGCCTCCTACGGCATCGCCGCCATCATCCAGCCCGGGGGGAGCGTGCGGGACCAGGACTCCATCAGG GCGGCGGAGGAGGCGGGGATCGCCATGGTCTTCACCGGCGTGCGCCACTTCCGCCACTGA
Upstream 100 bases:
>100_bases AGCACCATGGTCAAGGAGATCGCCCGCTACGGGGGGGATGTCTCCAAGCTCGTACCCCCGGCGACCCTGAGGGCCTTGAA GGCCAAGTTGGGCCAGTAGA
Downstream 100 bases:
>100_bases GCCAGGAGCGGGCGGTTGTTTTGCCGGGGCCCCATGCCGGCGCAGACCGGCACGGGGTTTACTTCCCCACGCAGAAGTTC TGGAAGACCCGGGCCACCAC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MRSMWALLSVADKRGIVDFARGLAELGFRLLATGGTYRALREAGLPVTYISDFTGFPEILEGRVKTLHPKVHAALLARPD QEEELKALGLERIGVLAVNLYPFRETVARGASFAEALEQIDIGGPAMLRAAAKNHQAVLPVCDPEDYPRVLEALKAGPSP DFRQKLARKAFAHTALYDAAIAEWLSGEKFPEEKLLALRREASLRYGENPHQEAALYRVVGERGPLLEAQVLQGKAMSFN NYLDAEAAWNLVSEFAEPACVAVKHQNPCGVALGETPLEAYRKAYEADPVSIFGGIVAFNRPLDGPTAEALAEVFLEVVL APSFSPEARAVLARKKNLRLLQVPFPAQGPYLDLRRLRGGVLLQDADTEDPAEPKVVTERAPTPEEWPDLRFAWKVVKHV RSNAIVVAKGGMTLGIGVGQTNRLAAARHALEAAGERAKGAVLASDAFFPFDDVVRLAASYGIAAIIQPGGSVRDQDSIR AAEEAGIAMVFTGVRHFRH
Sequences:
>Translated_499_residues MRSMWALLSVADKRGIVDFARGLAELGFRLLATGGTYRALREAGLPVTYISDFTGFPEILEGRVKTLHPKVHAALLARPD QEEELKALGLERIGVLAVNLYPFRETVARGASFAEALEQIDIGGPAMLRAAAKNHQAVLPVCDPEDYPRVLEALKAGPSP DFRQKLARKAFAHTALYDAAIAEWLSGEKFPEEKLLALRREASLRYGENPHQEAALYRVVGERGPLLEAQVLQGKAMSFN NYLDAEAAWNLVSEFAEPACVAVKHQNPCGVALGETPLEAYRKAYEADPVSIFGGIVAFNRPLDGPTAEALAEVFLEVVL APSFSPEARAVLARKKNLRLLQVPFPAQGPYLDLRRLRGGVLLQDADTEDPAEPKVVTERAPTPEEWPDLRFAWKVVKHV RSNAIVVAKGGMTLGIGVGQTNRLAAARHALEAAGERAKGAVLASDAFFPFDDVVRLAASYGIAAIIQPGGSVRDQDSIR AAEEAGIAMVFTGVRHFRH >Mature_499_residues MRSMWALLSVADKRGIVDFARGLAELGFRLLATGGTYRALREAGLPVTYISDFTGFPEILEGRVKTLHPKVHAALLARPD QEEELKALGLERIGVLAVNLYPFRETVARGASFAEALEQIDIGGPAMLRAAAKNHQAVLPVCDPEDYPRVLEALKAGPSP DFRQKLARKAFAHTALYDAAIAEWLSGEKFPEEKLLALRREASLRYGENPHQEAALYRVVGERGPLLEAQVLQGKAMSFN NYLDAEAAWNLVSEFAEPACVAVKHQNPCGVALGETPLEAYRKAYEADPVSIFGGIVAFNRPLDGPTAEALAEVFLEVVL APSFSPEARAVLARKKNLRLLQVPFPAQGPYLDLRRLRGGVLLQDADTEDPAEPKVVTERAPTPEEWPDLRFAWKVVKHV RSNAIVVAKGGMTLGIGVGQTNRLAAARHALEAAGERAKGAVLASDAFFPFDDVVRLAASYGIAAIIQPGGSVRDQDSIR AAEEAGIAMVFTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=472, Percent_Identity=40.6779661016949, Blast_Score=279, Evalue=4e-75, Organism=Escherichia coli, GI1790439, Length=521, Percent_Identity=49.5201535508637, Blast_Score=463, Evalue=1e-132, Organism=Caenorhabditis elegans, GI71985564, Length=475, Percent_Identity=34.9473684210526, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71985574, Length=309, Percent_Identity=28.4789644012945, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323768, Length=469, Percent_Identity=38.8059701492537, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6323056, Length=463, Percent_Identity=39.7408207343413, Blast_Score=264, Evalue=2e-71, Organism=Drosophila melanogaster, GI24649832, Length=472, Percent_Identity=38.5593220338983, Blast_Score=261, Evalue=7e-70,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 54201; Mature: 54201
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSMWALLSVADKRGIVDFARGLAELGFRLLATGGTYRALREAGLPVTYISDFTGFPEIL CCHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCHHHHHHHCCCCEEECCCCCCCHHHH EGRVKTLHPKVHAALLARPDQEEELKALGLERIGVLAVNLYPFRETVARGASFAEALEQI HCHHHHHCHHHHHHHHCCCCCHHHHHHHCHHHHCEEEEEEEHHHHHHHCCCHHHHHHHHH DIGGPAMLRAAAKNHQAVLPVCDPEDYPRVLEALKAGPSPDFRQKLARKAFAHTALYDAA CCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IAEWLSGEKFPEEKLLALRREASLRYGENPHQEAALYRVVGERGPLLEAQVLQGKAMSFN HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC NYLDAEAAWNLVSEFAEPACVAVKHQNPCGVALGETPLEAYRKAYEADPVSIFGGIVAFN CCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHCC RPLDGPTAEALAEVFLEVVLAPSFSPEARAVLARKKNLRLLQVPFPAQGPYLDLRRLRGG CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCC VLLQDADTEDPAEPKVVTERAPTPEEWPDLRFAWKVVKHVRSNAIVVAKGGMTLGIGVGQ EEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEECCC TNRLAAARHALEAAGERAKGAVLASDAFFPFDDVVRLAASYGIAAIIQPGGSVRDQDSIR CHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHH AAEEAGIAMVFTGVRHFRH HHHHCCEEHHHHHHHHHCC >Mature Secondary Structure MRSMWALLSVADKRGIVDFARGLAELGFRLLATGGTYRALREAGLPVTYISDFTGFPEIL CCHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCHHHHHHHCCCCEEECCCCCCCHHHH EGRVKTLHPKVHAALLARPDQEEELKALGLERIGVLAVNLYPFRETVARGASFAEALEQI HCHHHHHCHHHHHHHHCCCCCHHHHHHHCHHHHCEEEEEEEHHHHHHHCCCHHHHHHHHH DIGGPAMLRAAAKNHQAVLPVCDPEDYPRVLEALKAGPSPDFRQKLARKAFAHTALYDAA CCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IAEWLSGEKFPEEKLLALRREASLRYGENPHQEAALYRVVGERGPLLEAQVLQGKAMSFN HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC NYLDAEAAWNLVSEFAEPACVAVKHQNPCGVALGETPLEAYRKAYEADPVSIFGGIVAFN CCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHCC RPLDGPTAEALAEVFLEVVLAPSFSPEARAVLARKKNLRLLQVPFPAQGPYLDLRRLRGG CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCC VLLQDADTEDPAEPKVVTERAPTPEEWPDLRFAWKVVKHVRSNAIVVAKGGMTLGIGVGQ EEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEECCC TNRLAAARHALEAAGERAKGAVLASDAFFPFDDVVRLAASYGIAAIIQPGGSVRDQDSIR CHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHH AAEEAGIAMVFTGVRHFRH HHHHCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA