| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yhbW [C]
Identifier: 55980634
GI number: 55980634
Start: 632038
End: 633078
Strand: Direct
Name: yhbW [C]
Synonym: TTHA0665
Alternate gene names: 55980634
Gene position: 632038-633078 (Clockwise)
Preceding gene: 55980632
Following gene: 55980643
Centisome position: 34.17
GC content: 70.7
Gene sequence:
>1041_bases ATGGAGCTCGGGCTCTACACCTTCGGCGAGCGCACCCTGGACCCCGACCTCGGCCGCCCCCCCACGGCCGAGGAGCGGCT TAGGCGCCTTCTGGAGGAGGCGGAGCTGGCGGAAAGGGTGGGGCTTGGGGTCTACGCCGTGGGGGAGCACCATCGGGAGG AGTACGTGGTCTCGGCCCCGGCGGTGGTCCTCGCCGCCATCGCCGCCCGCACCCGGAGGATCCGCCTCTCCAGCGCCGTG GTGGTCCTCTCCTCCGACGACCCCATCCGCGTCTTCCAGCAGTTCGCCACCCTGGACCTCCTCTCGGGGGGAAGGGCGGA GCTTTGGGTGGGCCGGGGCTCCTTCGTGGAGTCCTTCCCCCTCTTCGGCTACGAGCTAAGGGACTACGAGGCCCTCTTTG AGGAGAAGCTCGCCCTCCTCCTCAAGATCCGGGAGGAGGAGAAGGTCTTCTGGCCCGGGGGGCGGTTCACCAAGCCCATC CCCGGCCTCGGGGTCTACCCCAGGCCCAAGCAGAACCCCCTGCCCCTCTGGGTGGCGGCGGGGGGAAGCCCGGAGTCGGC GGTGCGGGCGGGCAGGCTCGGGCTTCCCCTGGTCCTCGGCATCATCGCCGGAAGCCCCAAGCGCTTCCTCCCCTTCGTGG AGCTTTACCGCAAGACTGCCCGGGAGCACGGCCACACCCCGAGGCTCGCCCTCGCGGCCCACGGCTTTCTCGCCGAGGAC GACGAGGAGGCCTTCCGCCTGGCCCTTCCCGCCTTCCTCCGGGTGATGAACAAGATCGGCCGGGAAAGGGGGTGGCGCCC CCTCACCCCGGAGTACTTCGCCTGGTCCAGGACCCTCGAGGGGGCCGACTTCATCGGCGACCCCGAGCGGGTGGCGGAGA AGGTCCTCTACTGGCACGAACTCTTCCGGCCGGAAAGGCTTCTCCTCCAGCTTTCCGTGGGCACCCTGCCCCACGCCCGG GTGCTCCGGGCCATTGAGCTTTTGGGCACCGAGGTCCTGCCCCGGGTGGAGCGGGCCCTCAGACCCCCCGCCGGAGGATA G
Upstream 100 bases:
>100_bases ACCCAGGCCTTCATGGGGGGAGTCTACCCTTTCGTGCCCCCGGGCGGAAAGGGTGGCCCCACATACTTTAAGAAATAAAG CCCCGGCCTACCCTTAGGCC
Downstream 100 bases:
>100_bases GCAAAAGCTCCGGCCGGACGAGCTCCGAAGGCGGGGCCTTTCCCTCCCTTAGGAGGGCCCGGACCTTGGTCATGCTGATG GCCGTGCGCTTCTCCCGGTG
Product: N5,N10-methylenetetrahydromethanopterin reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MELGLYTFGERTLDPDLGRPPTAEERLRRLLEEAELAERVGLGVYAVGEHHREEYVVSAPAVVLAAIAARTRRIRLSSAV VVLSSDDPIRVFQQFATLDLLSGGRAELWVGRGSFVESFPLFGYELRDYEALFEEKLALLLKIREEEKVFWPGGRFTKPI PGLGVYPRPKQNPLPLWVAAGGSPESAVRAGRLGLPLVLGIIAGSPKRFLPFVELYRKTAREHGHTPRLALAAHGFLAED DEEAFRLALPAFLRVMNKIGRERGWRPLTPEYFAWSRTLEGADFIGDPERVAEKVLYWHELFRPERLLLQLSVGTLPHAR VLRAIELLGTEVLPRVERALRPPAGG
Sequences:
>Translated_346_residues MELGLYTFGERTLDPDLGRPPTAEERLRRLLEEAELAERVGLGVYAVGEHHREEYVVSAPAVVLAAIAARTRRIRLSSAV VVLSSDDPIRVFQQFATLDLLSGGRAELWVGRGSFVESFPLFGYELRDYEALFEEKLALLLKIREEEKVFWPGGRFTKPI PGLGVYPRPKQNPLPLWVAAGGSPESAVRAGRLGLPLVLGIIAGSPKRFLPFVELYRKTAREHGHTPRLALAAHGFLAED DEEAFRLALPAFLRVMNKIGRERGWRPLTPEYFAWSRTLEGADFIGDPERVAEKVLYWHELFRPERLLLQLSVGTLPHAR VLRAIELLGTEVLPRVERALRPPAGG >Mature_346_residues MELGLYTFGERTLDPDLGRPPTAEERLRRLLEEAELAERVGLGVYAVGEHHREEYVVSAPAVVLAAIAARTRRIRLSSAV VVLSSDDPIRVFQQFATLDLLSGGRAELWVGRGSFVESFPLFGYELRDYEALFEEKLALLLKIREEEKVFWPGGRFTKPI PGLGVYPRPKQNPLPLWVAAGGSPESAVRAGRLGLPLVLGIIAGSPKRFLPFVELYRKTAREHGHTPRLALAAHGFLAED DEEAFRLALPAFLRVMNKIGRERGWRPLTPEYFAWSRTLEGADFIGDPERVAEKVLYWHELFRPERLLLQLSVGTLPHAR VLRAIELLGTEVLPRVERALRPPAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=205, Percent_Identity=29.2682926829268, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 38774; Mature: 38774
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELGLYTFGERTLDPDLGRPPTAEERLRRLLEEAELAERVGLGVYAVGEHHREEYVVSAP CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHEECCCH AVVLAAIAARTRRIRLSSAVVVLSSDDPIRVFQQFATLDLLSGGRAELWVGRGSFVESFP HHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCC LFGYELRDYEALFEEKLALLLKIREEEKVFWPGGRFTKPIPGLGVYPRPKQNPLPLWVAA CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC GGSPESAVRAGRLGLPLVLGIIAGSPKRFLPFVELYRKTAREHGHTPRLALAAHGFLAED CCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCC DEEAFRLALPAFLRVMNKIGRERGWRPLTPEYFAWSRTLEGADFIGDPERVAEKVLYWHE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LFRPERLLLQLSVGTLPHARVLRAIELLGTEVLPRVERALRPPAGG HCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MELGLYTFGERTLDPDLGRPPTAEERLRRLLEEAELAERVGLGVYAVGEHHREEYVVSAP CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHEECCCH AVVLAAIAARTRRIRLSSAVVVLSSDDPIRVFQQFATLDLLSGGRAELWVGRGSFVESFP HHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCC LFGYELRDYEALFEEKLALLLKIREEEKVFWPGGRFTKPIPGLGVYPRPKQNPLPLWVAA CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC GGSPESAVRAGRLGLPLVLGIIAGSPKRFLPFVELYRKTAREHGHTPRLALAAHGFLAED CCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCC DEEAFRLALPAFLRVMNKIGRERGWRPLTPEYFAWSRTLEGADFIGDPERVAEKVLYWHE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LFRPERLLLQLSVGTLPHARVLRAIELLGTEVLPRVERALRPPAGG HCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8796346 [H]