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The map label for this gene is clcB [H]

Identifier: 55980567

GI number: 55980567

Start: 564724

End: 566169

Strand: Reverse

Name: clcB [H]

Synonym: TTHA0598

Alternate gene names: 55980567

Gene position: 566169-564724 (Counterclockwise)

Preceding gene: 55980568

Following gene: 55980565

Centisome position: 30.61

GC content: 76.56

Gene sequence:

>1446_bases
ATGGAGCTTCTCGGTGAGGAGGGAAGAAGGCTTCTTCGGCTCGGCCTCCTTCCCGGCCTCCTAGGCGGGGGGCTCGCGGT
GGCCTTCCGCCTCCTCCTGGACCTCCTCCTCCTGGTCCCTCCCCTCGCCCTGCCCCTCGCGGGCGGGGCGGTGGGGCTTT
TCAGCGCCTGGCTTTACCGCAGGCTCCCCGACCTCCGCGGGGGCGGGGCGGACCGGGTCCTCCTCGCCTACCACCTGGGC
CAAGGCCGCCTCCCTCCCCGCCTCGGTCCCCTGAAGGCCCTCCTCACCGCCCTCACCCTGGGCCTCGGGGGAAGCGGGGG
GCAGGAAGGGCCCCTCCTCTACGCCGGGGGCGCCCTGGCCCAGGCCCTCCGCCCCCGCAACCCCGCCGAGGCCCGGGCCG
TCCTCCTCGCCGGGGGGGCGGCGGCCATCGCCGCCCTCTTCCACACCCCCTTGGGGGCGGCCTTCTTCGCCGCAGAGGTC
CTCTACCGGGGCTCGGCCCTGGAGGGGCGCCTCCTCGGCTACCTGGCGGTGGCGGCCATCTCCGGCTACGGCCTGCAGAG
CCTCCTCTTCGGCACCCACCCCCTCCTTCCCGTGCAGGGCCTCGAGGCCCCGCCCCTCTGGTTCGCCCTGGCCCTCGCCC
CCCTGGCCGCCCTCGGGGCCTTCGCCCTGGCCCGCGGGCTCGCCTGGAGCCGGGCCCGGCTCCAGGGCCCGGCCGCCCTC
CCCCTCGCCTTGGCCGCCTCGGGGACCCTCGCCCTCCTCTTCCCTCCCGCGCGGGGGACGAGCTACGAGGGCCTCGCCGC
CCTCCTCCAAGGGGAGGGCCCCAACCCCTTCCTCTTCCTCTTGGCCAAGGCCCTCGCCGTCCTCCTCTCGGCGGGAAGCG
GGGCCAGCGTGGGCCTCTTCGGGCCCAGCGTGGTCCTCGGAGGGGCCTTGGGGGCGGCCTTAGGGGCCCTCTTTGGGATC
GGGGGGCCGGGGCCCATCCTCCTCGGCCTCGTGGCCCTGGTGAGCGCCGCGGCCCGCACCCCCTTCGCCGCCGTGGTGCA
GATGGTGGAGATCACGGGCTCCTACGCCCTCCTGGTCCCGGGCCTCCTCGTGGCCTTCGGAGCCTTCGCCCTCAACCGGG
AGACCCTCTTCCCCCTCCAGCCTCCGGGCCCCGAGGCGAGCCCCGCCCACGCCGAGGACCTCCTCCGGGGCCTGGCCCAG
CTCCCCCCGGGCCGGCCCCTCCTCCTCGGGGACCTGGGGGCGGTCCTCCTCGAGGTGCGGGAAGGGCATCCCTGGGCGGG
GAAGCCCCTCAAGGACACCGCCCTGCCCCCCGGGGTCCTGGTGGGCCTCGTCTTCCGCCAAGCCCACCTCCTCGCCCCCC
GGGGGCAGGACCGGCTGGAGCCCGGGGACCGGGTCCTCCTCCTCGGGCCTAAGGAGGAGGTGGCCCGCTTCGCCGCCCGG
TCCTAA

Upstream 100 bases:

>100_bases
GCGGGGAACTACCTCCAGGGGGTGGGCCTGCCCGAGGTGGTGCGCTCGGGGAGGCGGGCGGCGCAAAGGGCCCTGGCCCA
CCTCTCCCTAGGCGAGGCCC

Downstream 100 bases:

>100_bases
TCCGCGCGGGGGCTTCGCCGCACGGGGCGGCCTCAGACCTGGACCACCTCGAGGCCCCGGAGCCGGTTGGCGGCGGCGGC
GAGCTCCAAGGGGCGTACCC

Product: transport integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MELLGEEGRRLLRLGLLPGLLGGGLAVAFRLLLDLLLLVPPLALPLAGGAVGLFSAWLYRRLPDLRGGGADRVLLAYHLG
QGRLPPRLGPLKALLTALTLGLGGSGGQEGPLLYAGGALAQALRPRNPAEARAVLLAGGAAAIAALFHTPLGAAFFAAEV
LYRGSALEGRLLGYLAVAAISGYGLQSLLFGTHPLLPVQGLEAPPLWFALALAPLAALGAFALARGLAWSRARLQGPAAL
PLALAASGTLALLFPPARGTSYEGLAALLQGEGPNPFLFLLAKALAVLLSAGSGASVGLFGPSVVLGGALGAALGALFGI
GGPGPILLGLVALVSAAARTPFAAVVQMVEITGSYALLVPGLLVAFGAFALNRETLFPLQPPGPEASPAHAEDLLRGLAQ
LPPGRPLLLGDLGAVLLEVREGHPWAGKPLKDTALPPGVLVGLVFRQAHLLAPRGQDRLEPGDRVLLLGPKEEVARFAAR
S

Sequences:

>Translated_481_residues
MELLGEEGRRLLRLGLLPGLLGGGLAVAFRLLLDLLLLVPPLALPLAGGAVGLFSAWLYRRLPDLRGGGADRVLLAYHLG
QGRLPPRLGPLKALLTALTLGLGGSGGQEGPLLYAGGALAQALRPRNPAEARAVLLAGGAAAIAALFHTPLGAAFFAAEV
LYRGSALEGRLLGYLAVAAISGYGLQSLLFGTHPLLPVQGLEAPPLWFALALAPLAALGAFALARGLAWSRARLQGPAAL
PLALAASGTLALLFPPARGTSYEGLAALLQGEGPNPFLFLLAKALAVLLSAGSGASVGLFGPSVVLGGALGAALGALFGI
GGPGPILLGLVALVSAAARTPFAAVVQMVEITGSYALLVPGLLVAFGAFALNRETLFPLQPPGPEASPAHAEDLLRGLAQ
LPPGRPLLLGDLGAVLLEVREGHPWAGKPLKDTALPPGVLVGLVFRQAHLLAPRGQDRLEPGDRVLLLGPKEEVARFAAR
S
>Mature_481_residues
MELLGEEGRRLLRLGLLPGLLGGGLAVAFRLLLDLLLLVPPLALPLAGGAVGLFSAWLYRRLPDLRGGGADRVLLAYHLG
QGRLPPRLGPLKALLTALTLGLGGSGGQEGPLLYAGGALAQALRPRNPAEARAVLLAGGAAAIAALFHTPLGAAFFAAEV
LYRGSALEGRLLGYLAVAAISGYGLQSLLFGTHPLLPVQGLEAPPLWFALALAPLAALGAFALARGLAWSRARLQGPAAL
PLALAASGTLALLFPPARGTSYEGLAALLQGEGPNPFLFLLAKALAVLLSAGSGASVGLFGPSVVLGGALGAALGALFGI
GGPGPILLGLVALVSAAARTPFAAVVQMVEITGSYALLVPGLLVAFGAFALNRETLFPLQPPGPEASPAHAEDLLRGLAQ
LPPGRPLLLGDLGAVLLEVREGHPWAGKPLKDTALPPGVLVGLVFRQAHLLAPRGQDRLEPGDRVLLLGPKEEVARFAAR
S

Specific function: Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response [H]

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 48864; Mature: 48864

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLGEEGRRLLRLGLLPGLLGGGLAVAFRLLLDLLLLVPPLALPLAGGAVGLFSAWLYR
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
RLPDLRGGGADRVLLAYHLGQGRLPPRLGPLKALLTALTLGLGGSGGQEGPLLYAGGALA
HCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECHHHH
QALRPRNPAEARAVLLAGGAAAIAALFHTPLGAAFFAAEVLYRGSALEGRLLGYLAVAAI
HHHCCCCCHHHEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SGYGLQSLLFGTHPLLPVQGLEAPPLWFALALAPLAALGAFALARGLAWSRARLQGPAAL
HCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLALAASGTLALLFPPARGTSYEGLAALLQGEGPNPFLFLLAKALAVLLSAGSGASVGLF
CHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
GPSVVLGGALGAALGALFGIGGPGPILLGLVALVSAAARTPFAAVVQMVEITGSYALLVP
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
GLLVAFGAFALNRETLFPLQPPGPEASPAHAEDLLRGLAQLPPGRPLLLGDLGAVLLEVR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
EGHPWAGKPLKDTALPPGVLVGLVFRQAHLLAPRGQDRLEPGDRVLLLGPKEEVARFAAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHCC
S
C
>Mature Secondary Structure
MELLGEEGRRLLRLGLLPGLLGGGLAVAFRLLLDLLLLVPPLALPLAGGAVGLFSAWLYR
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
RLPDLRGGGADRVLLAYHLGQGRLPPRLGPLKALLTALTLGLGGSGGQEGPLLYAGGALA
HCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECHHHH
QALRPRNPAEARAVLLAGGAAAIAALFHTPLGAAFFAAEVLYRGSALEGRLLGYLAVAAI
HHHCCCCCHHHEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SGYGLQSLLFGTHPLLPVQGLEAPPLWFALALAPLAALGAFALARGLAWSRARLQGPAAL
HCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLALAASGTLALLFPPARGTSYEGLAALLQGEGPNPFLFLLAKALAVLLSAGSGASVGLF
CHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
GPSVVLGGALGAALGALFGIGGPGPILLGLVALVSAAARTPFAAVVQMVEITGSYALLVP
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
GLLVAFGAFALNRETLFPLQPPGPEASPAHAEDLLRGLAQLPPGRPLLLGDLGAVLLEVR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
EGHPWAGKPLKDTALPPGVLVGLVFRQAHLLAPRGQDRLEPGDRVLLLGPKEEVARFAAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA