| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is braD [H]
Identifier: 55980558
GI number: 55980558
Start: 555887
End: 556762
Strand: Reverse
Name: braD [H]
Synonym: TTHA0589
Alternate gene names: 55980558
Gene position: 556762-555887 (Counterclockwise)
Preceding gene: 55980559
Following gene: 55980557
Centisome position: 30.1
GC content: 70.89
Gene sequence:
>876_bases GTGGCGGACCTCCTTCCCTACCTCATCGGCGGCTTGGCCAACGGGGCCCTCTACAGCCTCCTCGCCTTGGGCTTCGTCCT CGTCTACCGGGCGACCAGCGTGGTGAACTTCGCCATCGGGGAGTTCCTCCTCGTGGGGGCCTACCTCACCTACACCTTCG CCCTCCTCCTTCCCCTCCCCTTGGCCCTCCTCGCCGCCCTGCCCCTCGCCTTCCTCTTCGGGGTCCTGGTGGAACGGGGC TTCGTGCGGCCCCTTCTCGGCCGGAACGTGGTGGCGGTGATCATGGCGACCATCGGCCTCGCCGCCGCCCTGGATGGGGG GGTGCAGCTCCTCTGGGGCCCGGACCTCAAGTACCTGCCGGGAAGCCTCCCCGACCTCGGCTTTGAAGCGGGAGGGGTCT ACGTCTCCTCCCGGGCGGTCTGGAACCTCCTCCTGGCCCTGCCCTTGGGGCTCGGCCTCCTCTGGCTCCTCCGGAAAAGC CGCTACGGCGTCCTGGTCCGGGCCATCTCCGAGCGGGAGGTGGCCGCCTTGGCCCTGGGCATCCCCACGGCCCGGATCCT GGCCGGGGTCTGGGGGGTCTCCGCCCTCCTCGCCACCTTGGCGGGGGCCCTCCTCGCCGCGGCGAGCGGGGTGGGGCACA ACCTCGTCTTCTTCGGGCTCAAGGTCTTCCCCGTGGCCATCCTGGGGGGGCTTGACGCCGTGGGCGGGGCTCTGGCGGCG GGGTTTTTGCTCGGGGTCCTCGAGGCCCTCTCCCAGCGCTACCTGGAGGCCTACCTCCCCGGCTTCACCGAGGCCCTGCC CTTCGTGGTGGTCCTCCTCGTCCTCCTCGTGAGGCCCTACGGCCTCTTCGGGGAGCGGCAGATTGAGAGGGTGTGA
Upstream 100 bases:
>100_bases ACCAAGCTCTACCGGGCGAGCGTCAAGGACGGGCGCTTCAACGCCATCACCGACTGGCTGAAGCTGGCCTAGGGCCAGGC CCCTTCCCTCGGGAGGAAGC
Downstream 100 bases:
>100_bases TGCTTTCCGTGGAGAACCTCAAGGTGGTCTACCGGGGGGTCATCCTGGCCCTGGACGGGGTCTCCCTGGAGGTGGGGGAG GGGGAGGCCGTGGCCCTCCT
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLAALPLAFLFGVLVERG FVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKS RYGVLVRAISEREVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV
Sequences:
>Translated_291_residues MADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLAALPLAFLFGVLVERG FVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKS RYGVLVRAISEREVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV >Mature_290_residues ADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLAALPLAFLFGVLVERGF VRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSR YGVLVRAISEREVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAAG FLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=307, Percent_Identity=29.3159609120521, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30463; Mature: 30332
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALLAALPLAFLFGVLVERGFVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLP HHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC GSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSRYGVLVRAISEREVAALALG CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC IPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure ADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALLAALPLAFLFGVLVERGFVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLP HHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC GSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSRYGVLVRAISEREVAALALG CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC IPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]