Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is braD [H]

Identifier: 55980558

GI number: 55980558

Start: 555887

End: 556762

Strand: Reverse

Name: braD [H]

Synonym: TTHA0589

Alternate gene names: 55980558

Gene position: 556762-555887 (Counterclockwise)

Preceding gene: 55980559

Following gene: 55980557

Centisome position: 30.1

GC content: 70.89

Gene sequence:

>876_bases
GTGGCGGACCTCCTTCCCTACCTCATCGGCGGCTTGGCCAACGGGGCCCTCTACAGCCTCCTCGCCTTGGGCTTCGTCCT
CGTCTACCGGGCGACCAGCGTGGTGAACTTCGCCATCGGGGAGTTCCTCCTCGTGGGGGCCTACCTCACCTACACCTTCG
CCCTCCTCCTTCCCCTCCCCTTGGCCCTCCTCGCCGCCCTGCCCCTCGCCTTCCTCTTCGGGGTCCTGGTGGAACGGGGC
TTCGTGCGGCCCCTTCTCGGCCGGAACGTGGTGGCGGTGATCATGGCGACCATCGGCCTCGCCGCCGCCCTGGATGGGGG
GGTGCAGCTCCTCTGGGGCCCGGACCTCAAGTACCTGCCGGGAAGCCTCCCCGACCTCGGCTTTGAAGCGGGAGGGGTCT
ACGTCTCCTCCCGGGCGGTCTGGAACCTCCTCCTGGCCCTGCCCTTGGGGCTCGGCCTCCTCTGGCTCCTCCGGAAAAGC
CGCTACGGCGTCCTGGTCCGGGCCATCTCCGAGCGGGAGGTGGCCGCCTTGGCCCTGGGCATCCCCACGGCCCGGATCCT
GGCCGGGGTCTGGGGGGTCTCCGCCCTCCTCGCCACCTTGGCGGGGGCCCTCCTCGCCGCGGCGAGCGGGGTGGGGCACA
ACCTCGTCTTCTTCGGGCTCAAGGTCTTCCCCGTGGCCATCCTGGGGGGGCTTGACGCCGTGGGCGGGGCTCTGGCGGCG
GGGTTTTTGCTCGGGGTCCTCGAGGCCCTCTCCCAGCGCTACCTGGAGGCCTACCTCCCCGGCTTCACCGAGGCCCTGCC
CTTCGTGGTGGTCCTCCTCGTCCTCCTCGTGAGGCCCTACGGCCTCTTCGGGGAGCGGCAGATTGAGAGGGTGTGA

Upstream 100 bases:

>100_bases
ACCAAGCTCTACCGGGCGAGCGTCAAGGACGGGCGCTTCAACGCCATCACCGACTGGCTGAAGCTGGCCTAGGGCCAGGC
CCCTTCCCTCGGGAGGAAGC

Downstream 100 bases:

>100_bases
TGCTTTCCGTGGAGAACCTCAAGGTGGTCTACCGGGGGGTCATCCTGGCCCTGGACGGGGTCTCCCTGGAGGTGGGGGAG
GGGGAGGCCGTGGCCCTCCT

Product: branched-chain amino acid ABC transporter permease

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLAALPLAFLFGVLVERG
FVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKS
RYGVLVRAISEREVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA
GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV

Sequences:

>Translated_291_residues
MADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLAALPLAFLFGVLVERG
FVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKS
RYGVLVRAISEREVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA
GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV
>Mature_290_residues
ADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLAALPLAFLFGVLVERGF
VRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSR
YGVLVRAISEREVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAAG
FLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV

Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=307, Percent_Identity=29.3159609120521, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30463; Mature: 30332

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAALPLAFLFGVLVERGFVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLP
HHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
GSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSRYGVLVRAISEREVAALALG
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
IPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure 
ADLLPYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAALPLAFLFGVLVERGFVRPLLGRNVVAVIMATIGLAAALDGGVQLLWGPDLKYLP
HHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
GSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSRYGVLVRAISEREVAALALG
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
IPTARILAGVWGVSALLATLAGALLAAASGVGHNLVFFGLKVFPVAILGGLDAVGGALAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLVRPYGLFGERQIERV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2120183; 10984043; 2509433 [H]