| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980207
Identifier: 55980207
GI number: 55980207
Start: 231701
End: 232060
Strand: Reverse
Name: 55980207
Synonym: TTHA0238
Alternate gene names: NA
Gene position: 232060-231701 (Counterclockwise)
Preceding gene: 55980208
Following gene: 55980206
Centisome position: 12.55
GC content: 64.72
Gene sequence:
>360_bases ATGAGCCGAAAGACGGCCCTTTTCCTCCTGGACCTCCTCGCCCTCCTCCTCTTCGCCGGGGTGGGCCTCCTTTCCCACGG GCTTCCCCTCTCCTTGGGGGGCCTCGCCCGGAACGTCCTCCCCGTCCTCTTCGTCTGGCTCCTCCTTGCTCCCTTCCTCG GCACCTACAGGAGGCCCACCTGGAAAAACCTCCTCCTCACCTGGCTCTTCGCCTTCCCCGCGGGGCTATGGCTGAGGCAG ATGGTCTTGGGCGGGACTTTCGGGGTGGGGTTCTTCGTCTTCTTGGGCGTGGCCATGGGGTTCAGCCTCCTTTTCCTCCT TCTCCTAAGGGGCCTCGCCAAGGGGCTTCGCCTCTGGTAA
Upstream 100 bases:
>100_bases AGGCCTGGGGGTACGAGCTGGGCTTTAGGGAGGTCTTCGCCGGGCCCTTGGTGCGGAGCTCCTACCGGGCGGACCGGGTC TTCCTGGAGGCCACCCAAAG
Downstream 100 bases:
>100_bases AAAAAAGCCATGGAAAAGGTGGCCTTCATCGGTCTTGGGGCCATGGGCTACCCCATGGCGGGGCACCTGGCGCGGCGTTT CCCCACCCTGGTCTGGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPTWKNLLLTWLFAFPAGLWLRQ MVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW
Sequences:
>Translated_119_residues MSRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPTWKNLLLTWLFAFPAGLWLRQ MVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW >Mature_118_residues SRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPTWKNLLLTWLFAFPAGLWLRQM VLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13173; Mature: 13042
Theoretical pI: Translated: 12.64; Mature: 12.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH WKNLLLTWLFAFPAGLWLRQMVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH WKNLLLTWLFAFPAGLWLRQMVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA