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The map label for this gene is ypdP [H]

Identifier: 55980190

GI number: 55980190

Start: 215784

End: 216452

Strand: Direct

Name: ypdP [H]

Synonym: TTHA0221

Alternate gene names: 55980190

Gene position: 215784-216452 (Clockwise)

Preceding gene: 55980189

Following gene: 55980191

Centisome position: 11.67

GC content: 66.97

Gene sequence:

>669_bases
ATGAGGTACCTGGACCTTCTCACCGCCCTCTTCGCCACGGTCCTCCTCGTCTCCAACGTGGCCTCCACCAAGCTCGTGGT
CCTGGGGCCCTTCACCTTTGACGGGGGCACCCTCCTCTTCCCCCTGGCCTACATCTTCGGGGACGTCCTCACCGAGGTCT
ACGGCTACCGGAAAAGCCGCAGGGTCATCTGGATCGGCTTTTTCGCCCTCCTCCTCGCCACCCTCACCTTCCAGGCGGTG
GCCCACCTCCCCGCCCCACCCGACGCGGAGAGCCAGCGCTTCGGCGAGGCCTTCGGCCTCCTCCTCGGCCTCACCCCCAG
GATCGTCCTGGGAAGCCTCCTCGCCTACTTCCTCGGGGAGTTCGCCAACGCCTACGTCCTCGCCAAGCTCAAGGTGCGGA
CGGAGGGGCGCTTCTTCTGGCTCCGGGCCCTCGCCTCCACCCTGGTGGGCCAGGGGCTGGACACCGGGGTCTTCCTCCTC
GTGGCCTTCTACGGGGTCTTCCCGAAGGAGGTCCTCCTCGCCGTCTTCCTCTCCAACTACGCCTTCAAGCTCGGGGTGGA
AGCCCTCATGCTCCCCTTCACCTACGCCGTGGTGGGGTTCCTGAAGCGGGCCGAGGGGATGGACGCCTACGACCGGGACA
CGGACTTCAACCCCTTCCGCCTGACCTGA

Upstream 100 bases:

>100_bases
GCTTTGAGATTGAGGACGCCTACGTCTACGGCTACGGCCTGGACCGGGCCCAGTTTGACCGCAACCTGCCCTTCATCACC
TCCATCCGCCCGGAGGAGGA

Downstream 100 bases:

>100_bases
GCCTTGGCTTTCGCCTGGCTCCTTCATTATACCGCGGCTTGCGCACTTGTAAAGGCCTATGCGCCGCTCCCGTCCCCGCC
TGTAGACTTAGAGGGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRYLDLLTALFATVLLVSNVASTKLVVLGPFTFDGGTLLFPLAYIFGDVLTEVYGYRKSRRVIWIGFFALLLATLTFQAV
AHLPAPPDAESQRFGEAFGLLLGLTPRIVLGSLLAYFLGEFANAYVLAKLKVRTEGRFFWLRALASTLVGQGLDTGVFLL
VAFYGVFPKEVLLAVFLSNYAFKLGVEALMLPFTYAVVGFLKRAEGMDAYDRDTDFNPFRLT

Sequences:

>Translated_222_residues
MRYLDLLTALFATVLLVSNVASTKLVVLGPFTFDGGTLLFPLAYIFGDVLTEVYGYRKSRRVIWIGFFALLLATLTFQAV
AHLPAPPDAESQRFGEAFGLLLGLTPRIVLGSLLAYFLGEFANAYVLAKLKVRTEGRFFWLRALASTLVGQGLDTGVFLL
VAFYGVFPKEVLLAVFLSNYAFKLGVEALMLPFTYAVVGFLKRAEGMDAYDRDTDFNPFRLT
>Mature_222_residues
MRYLDLLTALFATVLLVSNVASTKLVVLGPFTFDGGTLLFPLAYIFGDVLTEVYGYRKSRRVIWIGFFALLLATLTFQAV
AHLPAPPDAESQRFGEAFGLLLGLTPRIVLGSLLAYFLGEFANAYVLAKLKVRTEGRFFWLRALASTLVGQGLDTGVFLL
VAFYGVFPKEVLLAVFLSNYAFKLGVEALMLPFTYAVVGFLKRAEGMDAYDRDTDFNPFRLT

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 24583; Mature: 24583

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLDLLTALFATVLLVSNVASTKLVVLGPFTFDGGTLLFPLAYIFGDVLTEVYGYRKSR
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCHHHHHHHHHHHHHHHHHHCCHHCC
RVIWIGFFALLLATLTFQAVAHLPAPPDAESQRFGEAFGLLLGLTPRIVLGSLLAYFLGE
EEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FANAYVLAKLKVRTEGRFFWLRALASTLVGQGLDTGVFLLVAFYGVFPKEVLLAVFLSNY
HHCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
AFKLGVEALMLPFTYAVVGFLKRAEGMDAYDRDTDFNPFRLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRYLDLLTALFATVLLVSNVASTKLVVLGPFTFDGGTLLFPLAYIFGDVLTEVYGYRKSR
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCHHHHHHHHHHHHHHHHHHCCHHCC
RVIWIGFFALLLATLTFQAVAHLPAPPDAESQRFGEAFGLLLGLTPRIVLGSLLAYFLGE
EEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FANAYVLAKLKVRTEGRFFWLRALASTLVGQGLDTGVFLLVAFYGVFPKEVLLAVFLSNY
HHCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
AFKLGVEALMLPFTYAVVGFLKRAEGMDAYDRDTDFNPFRLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]