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The map label for this gene is 54295401

Identifier: 54295401

GI number: 54295401

Start: 2828021

End: 2829058

Strand: Direct

Name: 54295401

Synonym: lpl2487

Alternate gene names: NA

Gene position: 2828021-2829058 (Clockwise)

Preceding gene: 54295400

Following gene: 54295403

Centisome position: 84.53

GC content: 34.87

Gene sequence:

>1038_bases
ATGAGTAAAGAACCAACCAAAAGCTTAAAAATAAAAGACGAATTAACTGATTTCCTACTTTACACTTCACCTAATGGGCA
AGTAAAAGTGGAAGTATTATTGAATAATGAAACACTTTGGTTGACGCAACAACGCATTGCTGATCTTTTCGGTGTTCAAC
GCCCCGCAATTACTAAGCATCTAAAAAATATCTATGATCAAGGTGAATTGGACAAAAAAAGCACATGTTCCAATTTGGAA
CATATGGGTGACAATGGACAAGTTTACTCCACCAAGTATTACAATCTTGATGTTGTAATTTCAGTTGGCTATAGAGTTAA
TTCTAATCAAGCAACTCAATTCCGAATCTGGGCTACCAAGATGCTGAAAGAATACATCATCAAAGGTTTTGCCATGGATG
ATGATCGACTCAAAAATGGCCGATATTTTGGCAAAGACTATTTCCAAGAACTACTGGAAAGAATCCGTTCCATTCGAGCC
AGCGAACGCCGTATTTATCAACAGATCACGGATATCTTTGCTGAATGCAGTATAGATTATGATCCCAAATCTGAAATCAC
CAGACAATTTTATGCCCACGTACAAGATAAATTTCACTTTGCTATTACTGGTCAAACTGCATCAGAAATCGTTTATTCAA
AAGCAGATGCCAATAAACCACTTATGGGGATGATGACTTATAAAAATGCCCCTGATGGAAGAATACTAAAATCAGATACA
ACAGTAGGCAAAAACTACCTCTCAGAAAAAGAAATCAAACAACTAGAACGGACTGTATCAGGATTTTTTGACTACATAGA
AGGCATCATAGAACGTCGAAATACGCTCACCATGGAAGGTTTTGCTGAAAGTGTTAACAAATTCCTCGAGTTTAATGAAT
ACCAAATTTTAGAAGGTTATGGAAAAATATCTCGTAAACAAGCAGAACAAAAAGCATTTTCAGAATATGAAAAATTTAAT
AAACAGCAGCATATTGAGTCAGATTTTGATAAGGCAGTTAAGCTTCTAAAAAATAAATTTAAAGAAGAAAAAAAATGA

Upstream 100 bases:

>100_bases
AGGCTTCTTCATGATCAAGCTCAGCATCCAACCGCTTCCATTTCACTTGTTCCTAAGTTAAAAGGAATAGCCTCTGCAGA
ATTATAATAAGGTCGCAATT

Downstream 100 bases:

>100_bases
GCCAATAATAATTGGCCCAATAAGGAACAATATTCCCGCTAGGTTACATTGTGTAACCTACTCATAATCTCAAAGGGTGG
GGGCAAATGCTACCACCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSKEPTKSLKIKDELTDFLLYTSPNGQVKVEVLLNNETLWLTQQRIADLFGVQRPAITKHLKNIYDQGELDKKSTCSNLE
HMGDNGQVYSTKYYNLDVVISVGYRVNSNQATQFRIWATKMLKEYIIKGFAMDDDRLKNGRYFGKDYFQELLERIRSIRA
SERRIYQQITDIFAECSIDYDPKSEITRQFYAHVQDKFHFAITGQTASEIVYSKADANKPLMGMMTYKNAPDGRILKSDT
TVGKNYLSEKEIKQLERTVSGFFDYIEGIIERRNTLTMEGFAESVNKFLEFNEYQILEGYGKISRKQAEQKAFSEYEKFN
KQQHIESDFDKAVKLLKNKFKEEKK

Sequences:

>Translated_345_residues
MSKEPTKSLKIKDELTDFLLYTSPNGQVKVEVLLNNETLWLTQQRIADLFGVQRPAITKHLKNIYDQGELDKKSTCSNLE
HMGDNGQVYSTKYYNLDVVISVGYRVNSNQATQFRIWATKMLKEYIIKGFAMDDDRLKNGRYFGKDYFQELLERIRSIRA
SERRIYQQITDIFAECSIDYDPKSEITRQFYAHVQDKFHFAITGQTASEIVYSKADANKPLMGMMTYKNAPDGRILKSDT
TVGKNYLSEKEIKQLERTVSGFFDYIEGIIERRNTLTMEGFAESVNKFLEFNEYQILEGYGKISRKQAEQKAFSEYEKFN
KQQHIESDFDKAVKLLKNKFKEEKK
>Mature_344_residues
SKEPTKSLKIKDELTDFLLYTSPNGQVKVEVLLNNETLWLTQQRIADLFGVQRPAITKHLKNIYDQGELDKKSTCSNLEH
MGDNGQVYSTKYYNLDVVISVGYRVNSNQATQFRIWATKMLKEYIIKGFAMDDDRLKNGRYFGKDYFQELLERIRSIRAS
ERRIYQQITDIFAECSIDYDPKSEITRQFYAHVQDKFHFAITGQTASEIVYSKADANKPLMGMMTYKNAPDGRILKSDTT
VGKNYLSEKEIKQLERTVSGFFDYIEGIIERRNTLTMEGFAESVNKFLEFNEYQILEGYGKISRKQAEQKAFSEYEKFNK
QQHIESDFDKAVKLLKNKFKEEKK

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40331; Mature: 40200

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEPTKSLKIKDELTDFLLYTSPNGQVKVEVLLNNETLWLTQQRIADLFGVQRPAITKH
CCCCCCCCCEEHHHHHHEEEEECCCCCEEEEEEECCCEEEEEHHHHHHHHCCCCHHHHHH
LKNIYDQGELDKKSTCSNLEHMGDNGQVYSTKYYNLDVVISVGYRVNSNQATQFRIWATK
HHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECEEECCCCCCEEHHHHHH
MLKEYIIKGFAMDDDRLKNGRYFGKDYFQELLERIRSIRASERRIYQQITDIFAECSIDY
HHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DPKSEITRQFYAHVQDKFHFAITGQTASEIVYSKADANKPLMGMMTYKNAPDGRILKSDT
CCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCC
TVGKNYLSEKEIKQLERTVSGFFDYIEGIIERRNTLTMEGFAESVNKFLEFNEYQILEGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCHHHHHHH
GKISRKQAEQKAFSEYEKFNKQQHIESDFDKAVKLLKNKFKEEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKEPTKSLKIKDELTDFLLYTSPNGQVKVEVLLNNETLWLTQQRIADLFGVQRPAITKH
CCCCCCCCEEHHHHHHEEEEECCCCCEEEEEEECCCEEEEEHHHHHHHHCCCCHHHHHH
LKNIYDQGELDKKSTCSNLEHMGDNGQVYSTKYYNLDVVISVGYRVNSNQATQFRIWATK
HHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECEEECCCCCCEEHHHHHH
MLKEYIIKGFAMDDDRLKNGRYFGKDYFQELLERIRSIRASERRIYQQITDIFAECSIDY
HHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DPKSEITRQFYAHVQDKFHFAITGQTASEIVYSKADANKPLMGMMTYKNAPDGRILKSDT
CCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCC
TVGKNYLSEKEIKQLERTVSGFFDYIEGIIERRNTLTMEGFAESVNKFLEFNEYQILEGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCHHHHHHH
GKISRKQAEQKAFSEYEKFNKQQHIESDFDKAVKLLKNKFKEEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA