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The map label for this gene is 54295403

Identifier: 54295403

GI number: 54295403

Start: 2832440

End: 2833039

Strand: Direct

Name: 54295403

Synonym: lpl2489

Alternate gene names: NA

Gene position: 2832440-2833039 (Clockwise)

Preceding gene: 54295401

Following gene: 54295404

Centisome position: 84.66

GC content: 35.67

Gene sequence:

>600_bases
ATGAAATCAACGAGTGACAGTATTTTAAGACGAATCAGAGCGAAACAACGCGGTTGGGTTTTTACGCCCAAAGATTTTCT
TGATATCGCGCCTCGAAATACAGTAGGCGTGACCTTACTCAGGCTTGTTGAAAAAGGTATTATCAGGAAAATTGGGCATG
GGATATATGATTTTCCTGTCAAACATTCAAAACTCGGAACTTTATCAGCAAATCCAGATGCAATTGCAAGAGCGATTGCA
TCCAAAAAGGGTGATACTATTCGACCAGGCGGTGCTCAATTAGCTAATCAGCTTGGCTTTGATGATCAGGTATCAGCAAC
ACCGTCTTATATTGTTTCTGGTGTCTCTCGACAAAAAACCATAGCGAACTATCCAATAAAATTTAGTCATTCAAAATTTA
TGAATAATATACCTTTAAATCCCAATGTGATTAAGGTACTTAATGCATTAAACCATATTGGAAAGGATCATATTACTGAA
GATATGGTGCAGAAAAGTAAAAAAATATTGTCTCAAAGAGACAAAGCCCAACTTAAAAAAATATTGAATCAGTTACCAGA
CTGGATGATTTACGTTGTTTTAAAAATCATAGGAAAATAA

Upstream 100 bases:

>100_bases
TCATAAAATACAATTAAACGTTATATATCATATAGATATGAAGAATATTAAATAATTTTATGTAATGTTTTTGATATAAA
ATTTATTACATGGGTTAATC

Downstream 100 bases:

>100_bases
TAATGCAAGATCTATTGGAATTTAGTCCTAAAGAGCGCCAGCAAGCTTTTGAAGAGGCCACTGCTCGTTCCACAACAATT
AAGAACCCAATTATAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKSTSDSILRRIRAKQRGWVFTPKDFLDIAPRNTVGVTLLRLVEKGIIRKIGHGIYDFPVKHSKLGTLSANPDAIARAIA
SKKGDTIRPGGAQLANQLGFDDQVSATPSYIVSGVSRQKTIANYPIKFSHSKFMNNIPLNPNVIKVLNALNHIGKDHITE
DMVQKSKKILSQRDKAQLKKILNQLPDWMIYVVLKIIGK

Sequences:

>Translated_199_residues
MKSTSDSILRRIRAKQRGWVFTPKDFLDIAPRNTVGVTLLRLVEKGIIRKIGHGIYDFPVKHSKLGTLSANPDAIARAIA
SKKGDTIRPGGAQLANQLGFDDQVSATPSYIVSGVSRQKTIANYPIKFSHSKFMNNIPLNPNVIKVLNALNHIGKDHITE
DMVQKSKKILSQRDKAQLKKILNQLPDWMIYVVLKIIGK
>Mature_199_residues
MKSTSDSILRRIRAKQRGWVFTPKDFLDIAPRNTVGVTLLRLVEKGIIRKIGHGIYDFPVKHSKLGTLSANPDAIARAIA
SKKGDTIRPGGAQLANQLGFDDQVSATPSYIVSGVSRQKTIANYPIKFSHSKFMNNIPLNPNVIKVLNALNHIGKDHITE
DMVQKSKKILSQRDKAQLKKILNQLPDWMIYVVLKIIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22190; Mature: 22190

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTSDSILRRIRAKQRGWVFTPKDFLDIAPRNTVGVTLLRLVEKGIIRKIGHGIYDFPV
CCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
KHSKLGTLSANPDAIARAIASKKGDTIRPGGAQLANQLGFDDQVSATPSYIVSGVSRQKT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IANYPIKFSHSKFMNNIPLNPNVIKVLNALNHIGKDHITEDMVQKSKKILSQRDKAQLKK
HHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNQLPDWMIYVVLKIIGK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSTSDSILRRIRAKQRGWVFTPKDFLDIAPRNTVGVTLLRLVEKGIIRKIGHGIYDFPV
CCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
KHSKLGTLSANPDAIARAIASKKGDTIRPGGAQLANQLGFDDQVSATPSYIVSGVSRQKT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IANYPIKFSHSKFMNNIPLNPNVIKVLNALNHIGKDHITEDMVQKSKKILSQRDKAQLKK
HHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNQLPDWMIYVVLKIIGK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA