Click here to switch to the map view.

The map label for this gene is 54295217

Identifier: 54295217

GI number: 54295217

Start: 2617353

End: 2618807

Strand: Direct

Name: 54295217

Synonym: lpl2300

Alternate gene names: NA

Gene position: 2617353-2618807 (Clockwise)

Preceding gene: 54295214

Following gene: 54295218

Centisome position: 78.23

GC content: 34.57

Gene sequence:

>1455_bases
ATGGAAAATAAGACAAAGGCATTAAATTTTCTTAACCGTATTGAACGATGTCTTGTACCCCAATCAAATCCTCAAATGAT
GAAGCAATTATTATCAGCGCTCGGGCTGGATAATGTAACCACTGGCAATGAAGAATATAAATTTTTTATCCAAACAATTA
GAAAAAAAGCCATTGATCTGAAGCTGTTAATTGACAAGATCAAATCAGATATTTTAAAAAATGAACCTTTATGTACTTTG
CTTGCCTATATTGAAGAAAACGAATTAATTGATGACGCTGAAATTGAAAATGCGTCTTCTACGATACAGCTCCAGATTAA
TTTATTATGCCTTTTAGAAGCAATAACCATCACTATGGCCAACAGTAATGATTTTGCTCATGATATTTATAACCATATGA
TGAAGCAAAGAGGAAAAGGCGCCACAGGTAATCCTTTTTACAATTTTTTATTTGGAATACCTTCTCGTGCCACCTTATTT
GAAAGATTAAAACTGATTTCCATAGATCCTGGTTTGACAAGCATTATATTCCACCGACTGATGGGAGCAAATCCCGAAAC
TCAAGCTGATCTCGATGATTTTGTAAGTCAAAATCGTTTATCTGGATGGAATGCTGATATAGAACTTGCTAATTTTGATG
TTGCATCAACAAGTACTTTACCCGCTATGGGAGTTAATATTTTAGAAGCGGTGTGGGAAGACGCAACAGGCCACAATAAA
AATACCGGCGGTATTTTAAATGCACAAGCTGGCTTGGGATTAATTGGTATCATGGAAGAACAAGAATACACCACTTCTTT
TAAATTGGCTGAGACTACTTTGCCTCAGGGCACTGCACTTCATTCAGATTTAGGTTATTCATTGATACCTGAGCTAAAAG
TTGATAACTCACCAAAAAAAGTATCTCAGTTTCATATCGATAAGCGATGGATGAATTTATACAATAGCTGGAATTTATGT
TTTGTGATTGCAAATATAGACCCTGTATTCGTACCACTTAAATTGTTAATACCCAGTGTGTTTTCAGCGGAACCATCCAA
TTATAAAGAAACGAGAGTGCTCACCTTATTTCTTGTTGCCAATCTCTTCTTAAACCAAAAAACTCTTAATCACCCTCTAT
TTTCCAATAATTTTTCCTTTCGAAATGGAGCTACTATTATGAAAAAATGGGGGGAAATCAATAAAAATCATGCCAGTGAA
TTATTACAACAATGTTGTCTGAAAGAATACAAAGAACCTGATGCTTTATATAATAGTATATTTGGTGAGCATCCTCACTT
AAACTTTGTGTTAAAACTTGTCTCTTATTTTCAGGACTCACATCAGTTTAGACTCACTAAAACAGCAAAACAAACTACAT
TGAGCGATTATTCATTTTTCTCAGGTAATGCCGCATCTATGGATAATTCAGAGCAACTGCATTTAGCCTCTCAACCTTCT
TTGAATAAGGTATAA

Upstream 100 bases:

>100_bases
GTTTCCAGTTTCGAAACCGTTATTTTCCAAATGAATACATTCTATAAAAATATCAAATTGAGTAAAATACAATCACTTAG
ATTTAATTTAGGAATATAAT

Downstream 100 bases:

>100_bases
AAATTTTGTGCTTTTATCTCATTGAATAAGTACTTGGAACCGGAGACTTGTTATAGCTAGTCTCCGTTAAAAAATTTCCT
TTTGGAATCGCTCATGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MENKTKALNFLNRIERCLVPQSNPQMMKQLLSALGLDNVTTGNEEYKFFIQTIRKKAIDLKLLIDKIKSDILKNEPLCTL
LAYIEENELIDDAEIENASSTIQLQINLLCLLEAITITMANSNDFAHDIYNHMMKQRGKGATGNPFYNFLFGIPSRATLF
ERLKLISIDPGLTSIIFHRLMGANPETQADLDDFVSQNRLSGWNADIELANFDVASTSTLPAMGVNILEAVWEDATGHNK
NTGGILNAQAGLGLIGIMEEQEYTTSFKLAETTLPQGTALHSDLGYSLIPELKVDNSPKKVSQFHIDKRWMNLYNSWNLC
FVIANIDPVFVPLKLLIPSVFSAEPSNYKETRVLTLFLVANLFLNQKTLNHPLFSNNFSFRNGATIMKKWGEINKNHASE
LLQQCCLKEYKEPDALYNSIFGEHPHLNFVLKLVSYFQDSHQFRLTKTAKQTTLSDYSFFSGNAASMDNSEQLHLASQPS
LNKV

Sequences:

>Translated_484_residues
MENKTKALNFLNRIERCLVPQSNPQMMKQLLSALGLDNVTTGNEEYKFFIQTIRKKAIDLKLLIDKIKSDILKNEPLCTL
LAYIEENELIDDAEIENASSTIQLQINLLCLLEAITITMANSNDFAHDIYNHMMKQRGKGATGNPFYNFLFGIPSRATLF
ERLKLISIDPGLTSIIFHRLMGANPETQADLDDFVSQNRLSGWNADIELANFDVASTSTLPAMGVNILEAVWEDATGHNK
NTGGILNAQAGLGLIGIMEEQEYTTSFKLAETTLPQGTALHSDLGYSLIPELKVDNSPKKVSQFHIDKRWMNLYNSWNLC
FVIANIDPVFVPLKLLIPSVFSAEPSNYKETRVLTLFLVANLFLNQKTLNHPLFSNNFSFRNGATIMKKWGEINKNHASE
LLQQCCLKEYKEPDALYNSIFGEHPHLNFVLKLVSYFQDSHQFRLTKTAKQTTLSDYSFFSGNAASMDNSEQLHLASQPS
LNKV
>Mature_484_residues
MENKTKALNFLNRIERCLVPQSNPQMMKQLLSALGLDNVTTGNEEYKFFIQTIRKKAIDLKLLIDKIKSDILKNEPLCTL
LAYIEENELIDDAEIENASSTIQLQINLLCLLEAITITMANSNDFAHDIYNHMMKQRGKGATGNPFYNFLFGIPSRATLF
ERLKLISIDPGLTSIIFHRLMGANPETQADLDDFVSQNRLSGWNADIELANFDVASTSTLPAMGVNILEAVWEDATGHNK
NTGGILNAQAGLGLIGIMEEQEYTTSFKLAETTLPQGTALHSDLGYSLIPELKVDNSPKKVSQFHIDKRWMNLYNSWNLC
FVIANIDPVFVPLKLLIPSVFSAEPSNYKETRVLTLFLVANLFLNQKTLNHPLFSNNFSFRNGATIMKKWGEINKNHASE
LLQQCCLKEYKEPDALYNSIFGEHPHLNFVLKLVSYFQDSHQFRLTKTAKQTTLSDYSFFSGNAASMDNSEQLHLASQPS
LNKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54530; Mature: 54530

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKTKALNFLNRIERCLVPQSNPQMMKQLLSALGLDNVTTGNEEYKFFIQTIRKKAIDL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
KLLIDKIKSDILKNEPLCTLLAYIEENELIDDAEIENASSTIQLQINLLCLLEAITITMA
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEHHHHHHHHHHHEEE
NSNDFAHDIYNHMMKQRGKGATGNPFYNFLFGIPSRATLFERLKLISIDPGLTSIIFHRL
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHEEEEECCCHHHHHHHHH
MGANPETQADLDDFVSQNRLSGWNADIELANFDVASTSTLPAMGVNILEAVWEDATGHNK
HCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
NTGGILNAQAGLGLIGIMEEQEYTTSFKLAETTLPQGTALHSDLGYSLIPELKVDNSPKK
CCCCEEECCCCCCEEEEECCCCHHHHEEEHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHH
VSQFHIDKRWMNLYNSWNLCFVIANIDPVFVPLKLLIPSVFSAEPSNYKETRVLTLFLVA
HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NLFLNQKTLNHPLFSNNFSFRNGATIMKKWGEINKNHASELLQQCCLKEYKEPDALYNSI
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
FGEHPHLNFVLKLVSYFQDSHQFRLTKTAKQTTLSDYSFFSGNAASMDNSEQLHLASQPS
CCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC
LNKV
CCCC
>Mature Secondary Structure
MENKTKALNFLNRIERCLVPQSNPQMMKQLLSALGLDNVTTGNEEYKFFIQTIRKKAIDL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
KLLIDKIKSDILKNEPLCTLLAYIEENELIDDAEIENASSTIQLQINLLCLLEAITITMA
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEHHHHHHHHHHHEEE
NSNDFAHDIYNHMMKQRGKGATGNPFYNFLFGIPSRATLFERLKLISIDPGLTSIIFHRL
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHEEEEECCCHHHHHHHHH
MGANPETQADLDDFVSQNRLSGWNADIELANFDVASTSTLPAMGVNILEAVWEDATGHNK
HCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
NTGGILNAQAGLGLIGIMEEQEYTTSFKLAETTLPQGTALHSDLGYSLIPELKVDNSPKK
CCCCEEECCCCCCEEEEECCCCHHHHEEEHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHH
VSQFHIDKRWMNLYNSWNLCFVIANIDPVFVPLKLLIPSVFSAEPSNYKETRVLTLFLVA
HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NLFLNQKTLNHPLFSNNFSFRNGATIMKKWGEINKNHASELLQQCCLKEYKEPDALYNSI
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
FGEHPHLNFVLKLVSYFQDSHQFRLTKTAKQTTLSDYSFFSGNAASMDNSEQLHLASQPS
CCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC
LNKV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA