Click here to switch to the map view.

The map label for this gene is 54295214

Identifier: 54295214

GI number: 54295214

Start: 2615308

End: 2615742

Strand: Direct

Name: 54295214

Synonym: lpl2297

Alternate gene names: NA

Gene position: 2615308-2615742 (Clockwise)

Preceding gene: 54295213

Following gene: 54295217

Centisome position: 78.17

GC content: 37.7

Gene sequence:

>435_bases
ATGCCTTTTCAACTTCCTTTTGAAAAAAAGAAAAACCCATTAAATCCAGAGAGGCTCTGTTCTTCAGATATTTGTTTCGT
GAACCTGTCAGTATTTTCTGCTTCGGAATTATTCGCAGGGGCAGACCCGGAAAAGGTCATACAAGAATTAACTATGGTAA
ACAAATCATATGGCTCAGCAATAAGCTATAATAGATTGCCCGCTGGCTCTACAAAAGATCTGTCAGAGCATTCAAAATAT
TACCTTAATCTTATCGATAAGGCTATTGAGGATGTGAATTTAAGTCTGGATGACAATAGCAAGGCAACGTATTCTCTCAG
ATTTGCTCTATTACAACCATTACTTGTGAACCTGGTAGCGGCTGCGGAAGTATTGAAAAACGAAAAAACTCAAGAGCAGG
AACAAAAATCAAGTCATTCTGTAAGATTCATGTAG

Upstream 100 bases:

>100_bases
GAGATGGTAAGGCAAAGACAGATTAGTCTGGTGCAAATGTCACAGCAATGGATTCGATATTTTTATACTATAATTTATTT
AAACTCAAACGGAGAATGTC

Downstream 100 bases:

>100_bases
TTCCTACCTCTTCATCCAGAGTTGGGAAATCAAATGATATGGACTCATCTGGCATTTAAAAACACTATCAAGACTTCCTT
TTGGAATGGTTAGTGATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPFQLPFEKKKNPLNPERLCSSDICFVNLSVFSASELFAGADPEKVIQELTMVNKSYGSAISYNRLPAGSTKDLSEHSKY
YLNLIDKAIEDVNLSLDDNSKATYSLRFALLQPLLVNLVAAAEVLKNEKTQEQEQKSSHSVRFM

Sequences:

>Translated_144_residues
MPFQLPFEKKKNPLNPERLCSSDICFVNLSVFSASELFAGADPEKVIQELTMVNKSYGSAISYNRLPAGSTKDLSEHSKY
YLNLIDKAIEDVNLSLDDNSKATYSLRFALLQPLLVNLVAAAEVLKNEKTQEQEQKSSHSVRFM
>Mature_143_residues
PFQLPFEKKKNPLNPERLCSSDICFVNLSVFSASELFAGADPEKVIQELTMVNKSYGSAISYNRLPAGSTKDLSEHSKYY
LNLIDKAIEDVNLSLDDNSKATYSLRFALLQPLLVNLVAAAEVLKNEKTQEQEQKSSHSVRFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16163; Mature: 16031

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFQLPFEKKKNPLNPERLCSSDICFVNLSVFSASELFAGADPEKVIQELTMVNKSYGSA
CCCCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
ISYNRLPAGSTKDLSEHSKYYLNLIDKAIEDVNLSLDDNSKATYSLRFALLQPLLVNLVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAEVLKNEKTQEQEQKSSHSVRFM
HHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PFQLPFEKKKNPLNPERLCSSDICFVNLSVFSASELFAGADPEKVIQELTMVNKSYGSA
CCCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
ISYNRLPAGSTKDLSEHSKYYLNLIDKAIEDVNLSLDDNSKATYSLRFALLQPLLVNLVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAEVLKNEKTQEQEQKSSHSVRFM
HHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA