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The map label for this gene is cynT [C]

Identifier: 54295038

GI number: 54295038

Start: 2420957

End: 2421583

Strand: Direct

Name: cynT [C]

Synonym: lpl2118

Alternate gene names: 54295038

Gene position: 2420957-2421583 (Clockwise)

Preceding gene: 54295037

Following gene: 54295042

Centisome position: 72.36

GC content: 38.92

Gene sequence:

>627_bases
ATGTGGACTTTAACCAAAGAACAACAACAAGCAATTACTCCAGAGAAAGCTATTGAGCTCTTAAAAGAAGGCAATAAGCG
TTTTGTTAGTAACCTTAAGTTAAATCGCAACTTGATCCAGCAAGTCAATGAAACATTCCAAGGGCAATTTCCATTTGCTG
TTATTTTAAGCTGTATGGATTCACGAACTCCAGCAGAGCTGATTTTTGACCAAGGCCTTGGTGATATTTTCAGTATTCGC
GTTGCAGGTAATATTTTAAATGATGATATCCTGGGCAGCATTGAATTTGCATGTCAGGTAGTAGGTGTCAAGCTGATTGC
AGTTGTCGGCCATACTCAGTGTGGGGCAATTAAAGGAGCTTGTGATGGTGTAAAATTGGGCAATCTGACAAACCTACTGA
ATAAAATCAACCCAGTGATTCAGGAAGCCAAAAAGCTGGATGCAAAGCATGATGTTCATAGCCCAGAGTTTTTGAATTGC
GTTACGAGTCTGAATGTAAAACATACCATGAATGAAATTACCCAACGCAGTGATATCGTACATCAATTGCTTAATGAAAA
AAGAATTGCGCTTGCAGGTGGTTTATATCAGCTTGAGACAGGAGAAGTTCAATTTTTTGATGAGTGA

Upstream 100 bases:

>100_bases
ATCCAAAATTATTGATCATGATATTAAAGAAGTCTTTCAAAATTTCATTTTGAATTCAAAAACTAAAAATATTCAAGTTA
AATTAATAGGAATTTAAATT

Downstream 100 bases:

>100_bases
TATCATGATATTAATAACTTTCAATGATTAGTCTTTTCAACTGTGCAACATTTCTGATACCTAAAGCTTTTACCAGGAAT
TGATGCGGGCTTGGTGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MWTLTKEQQQAITPEKAIELLKEGNKRFVSNLKLNRNLIQQVNETFQGQFPFAVILSCMDSRTPAELIFDQGLGDIFSIR
VAGNILNDDILGSIEFACQVVGVKLIAVVGHTQCGAIKGACDGVKLGNLTNLLNKINPVIQEAKKLDAKHDVHSPEFLNC
VTSLNVKHTMNEITQRSDIVHQLLNEKRIALAGGLYQLETGEVQFFDE

Sequences:

>Translated_208_residues
MWTLTKEQQQAITPEKAIELLKEGNKRFVSNLKLNRNLIQQVNETFQGQFPFAVILSCMDSRTPAELIFDQGLGDIFSIR
VAGNILNDDILGSIEFACQVVGVKLIAVVGHTQCGAIKGACDGVKLGNLTNLLNKINPVIQEAKKLDAKHDVHSPEFLNC
VTSLNVKHTMNEITQRSDIVHQLLNEKRIALAGGLYQLETGEVQFFDE
>Mature_208_residues
MWTLTKEQQQAITPEKAIELLKEGNKRFVSNLKLNRNLIQQVNETFQGQFPFAVILSCMDSRTPAELIFDQGLGDIFSIR
VAGNILNDDILGSIEFACQVVGVKLIAVVGHTQCGAIKGACDGVKLGNLTNLLNKINPVIQEAKKLDAKHDVHSPEFLNC
VTSLNVKHTMNEITQRSDIVHQLLNEKRIALAGGLYQLETGEVQFFDE

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=193, Percent_Identity=29.0155440414508, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 23058; Mature: 23058

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTLTKEQQQAITPEKAIELLKEGNKRFVSNLKLNRNLIQQVNETFQGQFPFAVILSCMD
CCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SRTPAELIFDQGLGDIFSIRVAGNILNDDILGSIEFACQVVGVKLIAVVGHTQCGAIKGA
CCCHHHHHHHCCCCCEEEHEECCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
CDGVKLGNLTNLLNKINPVIQEAKKLDAKHDVHSPEFLNCVTSLNVKHTMNEITQRSDIV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
HQLLNEKRIALAGGLYQLETGEVQFFDE
HHHHCCCCEEEECCEEEEECCCEEEECC
>Mature Secondary Structure
MWTLTKEQQQAITPEKAIELLKEGNKRFVSNLKLNRNLIQQVNETFQGQFPFAVILSCMD
CCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SRTPAELIFDQGLGDIFSIRVAGNILNDDILGSIEFACQVVGVKLIAVVGHTQCGAIKGA
CCCHHHHHHHCCCCCEEEHEECCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
CDGVKLGNLTNLLNKINPVIQEAKKLDAKHDVHSPEFLNCVTSLNVKHTMNEITQRSDIV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
HQLLNEKRIALAGGLYQLETGEVQFFDE
HHHHCCCCEEEECCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA