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The map label for this gene is yvdB [H]

Identifier: 54295037

GI number: 54295037

Start: 2419433

End: 2420953

Strand: Direct

Name: yvdB [H]

Synonym: lpl2117

Alternate gene names: 54295037

Gene position: 2419433-2420953 (Clockwise)

Preceding gene: 54295036

Following gene: 54295038

Centisome position: 72.31

GC content: 37.02

Gene sequence:

>1521_bases
ATGAAGCGTGGTTTATTTGTCCATCTCAAACATGACTTACCAGCATCGATTGTTGTTTTTTTTGTGGCTTTACCTTTATG
TCTGGGCATAGCATTGGCTTCTCATGTTCCTCTTTTTTCAGGAATCATTGCTGGTGTTATTGGTGGAGTAGTCGTAGGGT
TTATCAGCGGCTCAGCGCTTGGAGTAAGCGGGCCAGCAGCAGGACTTGTAGCAATAGTCATTTCCTCTGTAGAGACATTA
GGCAGCTGGGAAGCTTTTTTGTTAGCTGGTGTGATTGCTGGAATATTGCAATTAATTGCAGGTTTTCTGCGAGGTGGAAT
TATTGCTTACTACTTTCCCTCCTCCGTAATCAAAGGCATGCTCACGGGAATCGGTATCATTATTGTTTTAAAACAAATTC
CTCACTTGTTAGGACACGACGTCACGCCACTTCTATTGAGTATGTCGGATGGTGAATTGGATATTAATGACATCAGAGAA
GCATTGGATGATATTAATCCTGAGGTTGTTATTATCAGCATTGTTTCTCTTTTAACCCTGATTTTTTGGGAGAAAGTGCT
GGTAAAAAAACACAAACTATTTGAAATGATACAAGGCCCCCTTGTCGTGGTCATCCTGGGAATTGCTTTAAACTTGTTTT
ATGAACACCGACTAACAAGTTTTTCCCTTGATCCATCGGAACTGGTTCAACTGCCGAAATTTAACAAAGCATCCGAATTA
TTTAATTATTTAACACTGCCTGATTTTTCGCTAATTACTCATTTGAAAATATACAAAATAGCAATCCTCATTGCCCTAAT
CGCCAGTTTGGAAACACTGCTCTGCGTAGAAGCTGTTGATAAACTGGATCCCTACAAGAGAGTAACGTCTACAGACCGTG
AATTAAAAGCCCAGGGGGTAGGAAATATACTCTCTTGCTTGATTGGCGGACTACCGATTACACAGGTTATTGTGCGTAGT
AGTGCCAATGTCGCTTTTGGAGCAAAATCCAAGCTGTCCGCCATTTTACATGGCTTATTACTTTTTATTTGTGTCATCAG
CATACCAGAAATACTCAATGAAATTCCACTTGCATCATTAGCCAGTATTTTGATTATTATAGGCTATAAGTTAGCCAAGC
CGGCTTTATTCAAACAAATGTATAAAATGGGATGGGAACAGTTTGTACCATTTCTTATTACAATTATTGGAATTATTTTT
AGTGACTTGCTTTTCGGGATTACTTTAGGCTTTTCAGTAGCTATTTTTATTATCTTGCGCCATCACTTTCTTAATTCACA
TGATATTATTAAAATCCGTGGCAAAAATAAAACTCAATACTGTCTGAAACTGGCGGAAGAGGTAACTTTTTTAAATAAAG
GAAGTATAATCAACGAATTAAAGAATATACCAGAAGGTGCAGAGGTAATTATTGATGGGTCTCGATCCAAAATTATTGAT
CATGATATTAAAGAAGTCTTTCAAAATTTCATTTTGAATTCAAAAACTAAAAATATTCAAGTTAAATTAATAGGAATTTA
A

Upstream 100 bases:

>100_bases
TAACTTTTTACAATAAAAATACCAGATAAACTATACTTTCAATTTAGAAAACACATTAGTATTACAGAGGCTCAAGCAAA
CAACTGAATATGAGGCCATT

Downstream 100 bases:

>100_bases
ATTATGTGGACTTTAACCAAAGAACAACAACAAGCAATTACTCCAGAGAAAGCTATTGAGCTCTTAAAAGAAGGCAATAA
GCGTTTTGTTAGTAACCTTA

Product: hypothetical protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MKRGLFVHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSALGVSGPAAGLVAIVISSVETL
GSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIRE
ALDDINPEVVIISIVSLLTLIFWEKVLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELVQLPKFNKASEL
FNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGVGNILSCLIGGLPITQVIVRS
SANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFVPFLITIIGIIF
SDLLFGITLGFSVAIFIILRHHFLNSHDIIKIRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEVIIDGSRSKIID
HDIKEVFQNFILNSKTKNIQVKLIGI

Sequences:

>Translated_506_residues
MKRGLFVHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSALGVSGPAAGLVAIVISSVETL
GSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIRE
ALDDINPEVVIISIVSLLTLIFWEKVLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELVQLPKFNKASEL
FNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGVGNILSCLIGGLPITQVIVRS
SANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFVPFLITIIGIIF
SDLLFGITLGFSVAIFIILRHHFLNSHDIIKIRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEVIIDGSRSKIID
HDIKEVFQNFILNSKTKNIQVKLIGI
>Mature_506_residues
MKRGLFVHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSALGVSGPAAGLVAIVISSVETL
GSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIRE
ALDDINPEVVIISIVSLLTLIFWEKVLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELVQLPKFNKASEL
FNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGVGNILSCLIGGLPITQVIVRS
SANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFVPFLITIIGIIF
SDLLFGITLGFSVAIFIILRHHFLNSHDIIKIRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEVIIDGSRSKIID
HDIKEVFQNFILNSKTKNIQVKLIGI

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=499, Percent_Identity=25.8517034068136, Blast_Score=115, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI17566848, Length=432, Percent_Identity=22.6851851851852, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=571, Percent_Identity=23.1173380035026, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI19922482, Length=511, Percent_Identity=21.3307240704501, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 55087; Mature: 55087

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGLFVHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSAL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
GVSGPAAGLVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGM
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHH
LTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIREALDDINPEVVIISIVSLLTL
HHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
IFWEKVLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELVQLPKFNKASEL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHH
FNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH
GNILSCLIGGLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASL
HHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ASILIIIGYKLAKPALFKQMYKMGWEQFVPFLITIIGIIFSDLLFGITLGFSVAIFIILR
HHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHFLNSHDIIKIRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEVIIDGSRSKIID
HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHH
HDIKEVFQNFILNSKTKNIQVKLIGI
HHHHHHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure
MKRGLFVHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSAL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
GVSGPAAGLVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGM
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHH
LTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIREALDDINPEVVIISIVSLLTL
HHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
IFWEKVLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELVQLPKFNKASEL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHH
FNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHH
GNILSCLIGGLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASL
HHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ASILIIIGYKLAKPALFKQMYKMGWEQFVPFLITIIGIIFSDLLFGITLGFSVAIFIILR
HHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHFLNSHDIIKIRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEVIIDGSRSKIID
HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHH
HDIKEVFQNFILNSKTKNIQVKLIGI
HHHHHHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]