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The map label for this gene is 54294253

Identifier: 54294253

GI number: 54294253

Start: 1473493

End: 1474392

Strand: Direct

Name: 54294253

Synonym: lpl1318

Alternate gene names: NA

Gene position: 1473493-1474392 (Clockwise)

Preceding gene: 54294252

Following gene: 54294254

Centisome position: 44.04

GC content: 35.67

Gene sequence:

>900_bases
ATGTGGAATTTGTCCAGTCGGGTGCATGCCCTTAATCATTTCCCCAAGCAAGGTATAGAGTGTTATGTTAAGAGAGATGA
TGAATTAGGTTGCGGCATAAGTGGTACAAAGATAAGGAAATACAGCAGTTTAATCCCGTTTCTAAAAATCAACGGAATTC
GACATCTGATTATTATTGCGGGTGCTCAATCTAATAATTTATTGGCTGCTCTGCAGGTGGCTAGAGAATGTCAATTGAAA
GTGACAGCTTTCCTAGTAAAACCCAAACATTTAAAAATTCAGGGTAATTTTAAATTAAGCCTTCTTTTTCTTCATGAGAA
TGAAATTATCTGGATAAATCGAGAAGAATGGTATCGAGTCAATGAATTCGCTGAGCAGTATCTTGAGGGGCTCAGAGAAA
CGGCTTATATTTTATCTGAAGGTGCCAGTGTTAAAGAATCCATGAAGGGGGCAATGTCTCTAGCCAGTGATATCAAGGAA
AATGAAAAGATTTTGGGATTTGCTTTTGATCATATCTTTGTTGATGCAGGTACAGGTTTTTCAGCAATCGCACTAATTAA
AGGTTTTTATGAATTACAGCATAAAGGATTTATTCATGTGTTATTGTTAGCAGATAGTGAGGAGGTTTTTAAGAAAAAAC
TTATGCATTGGGCGGGAGTAAACCCTGATAATTACGCTTGTTTTTACCCAACCACTGCGAAATCGTTTGGATCTGTAAAT
CAAACAATTAAACAAGAAATTAAACGATTGGCTTATGAAGAAGGCATTTTGGCTGATCCGATTTACTCTGCAAAATTATT
CTATGAAGCCAGAAAATATATAGAAACATACCAATTAAAAGGAAGAGCATTAATTATACATTCTGGTGGAGTTTTAACTG
TTCCTGGTTTTGATTTTTAG

Upstream 100 bases:

>100_bases
AAAGAGTTTTCTGAGTCAGGTTATTTATTTAATAAAGAAATTTCCAGTCCAAATAGTTTGAATTTTATTCGAATCCATTA
AATTATTTAAAAGGTATTTG

Downstream 100 bases:

>100_bases
AAATAGTCCTGTTTCTTGGAAAAGATGTAATTTCTGAATGATCACTTTTTCCTGACCGTAAAATAAAGTTAATCAAGAAT
TTTCAGAATATTTAGAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: ACC deaminase [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MWNLSSRVHALNHFPKQGIECYVKRDDELGCGISGTKIRKYSSLIPFLKINGIRHLIIIAGAQSNNLLAALQVARECQLK
VTAFLVKPKHLKIQGNFKLSLLFLHENEIIWINREEWYRVNEFAEQYLEGLRETAYILSEGASVKESMKGAMSLASDIKE
NEKILGFAFDHIFVDAGTGFSAIALIKGFYELQHKGFIHVLLLADSEEVFKKKLMHWAGVNPDNYACFYPTTAKSFGSVN
QTIKQEIKRLAYEEGILADPIYSAKLFYEARKYIETYQLKGRALIIHSGGVLTVPGFDF

Sequences:

>Translated_299_residues
MWNLSSRVHALNHFPKQGIECYVKRDDELGCGISGTKIRKYSSLIPFLKINGIRHLIIIAGAQSNNLLAALQVARECQLK
VTAFLVKPKHLKIQGNFKLSLLFLHENEIIWINREEWYRVNEFAEQYLEGLRETAYILSEGASVKESMKGAMSLASDIKE
NEKILGFAFDHIFVDAGTGFSAIALIKGFYELQHKGFIHVLLLADSEEVFKKKLMHWAGVNPDNYACFYPTTAKSFGSVN
QTIKQEIKRLAYEEGILADPIYSAKLFYEARKYIETYQLKGRALIIHSGGVLTVPGFDF
>Mature_299_residues
MWNLSSRVHALNHFPKQGIECYVKRDDELGCGISGTKIRKYSSLIPFLKINGIRHLIIIAGAQSNNLLAALQVARECQLK
VTAFLVKPKHLKIQGNFKLSLLFLHENEIIWINREEWYRVNEFAEQYLEGLRETAYILSEGASVKESMKGAMSLASDIKE
NEKILGFAFDHIFVDAGTGFSAIALIKGFYELQHKGFIHVLLLADSEEVFKKKLMHWAGVNPDNYACFYPTTAKSFGSVN
QTIKQEIKRLAYEEGILADPIYSAKLFYEARKYIETYQLKGRALIIHSGGVLTVPGFDF

Specific function: Unknown

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 33902; Mature: 33902

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNLSSRVHALNHFPKQGIECYVKRDDELGCGISGTKIRKYSSLIPFLKINGIRHLIIIA
CCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCEEEECCEEEEEEEE
GAQSNNLLAALQVARECQLKVTAFLVKPKHLKIQGNFKLSLLFLHENEIIWINREEWYRV
ECCCCCHHHHHHHHHHCCEEEEEEEECCCEEEEECCEEEEEEEEECCEEEEEECHHHEEH
NEFAEQYLEGLRETAYILSEGASVKESMKGAMSLASDIKENEKILGFAFDHIFVDAGTGF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCH
SAIALIKGFYELQHKGFIHVLLLADSEEVFKKKLMHWAGVNPDNYACFYPTTAKSFGSVN
HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
QTIKQEIKRLAYEEGILADPIYSAKLFYEARKYIETYQLKGRALIIHSGGVLTVPGFDF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCEEECCCCCC
>Mature Secondary Structure
MWNLSSRVHALNHFPKQGIECYVKRDDELGCGISGTKIRKYSSLIPFLKINGIRHLIIIA
CCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCEEEECCEEEEEEEE
GAQSNNLLAALQVARECQLKVTAFLVKPKHLKIQGNFKLSLLFLHENEIIWINREEWYRV
ECCCCCHHHHHHHHHHCCEEEEEEEECCCEEEEECCEEEEEEEEECCEEEEEECHHHEEH
NEFAEQYLEGLRETAYILSEGASVKESMKGAMSLASDIKENEKILGFAFDHIFVDAGTGF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCH
SAIALIKGFYELQHKGFIHVLLLADSEEVFKKKLMHWAGVNPDNYACFYPTTAKSFGSVN
HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
QTIKQEIKRLAYEEGILADPIYSAKLFYEARKYIETYQLKGRALIIHSGGVLTVPGFDF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]