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The map label for this gene is yaaA [C]

Identifier: 54294252

GI number: 54294252

Start: 1472700

End: 1473473

Strand: Direct

Name: yaaA [C]

Synonym: lpl1317

Alternate gene names: 54294252

Gene position: 1472700-1473473 (Clockwise)

Preceding gene: 54294251

Following gene: 54294253

Centisome position: 44.02

GC content: 31.91

Gene sequence:

>774_bases
ATGTTAACTTTGTTATCGCCAGCTAAGAAACTATTATCCATATCAAAACATTACTCTAAAAAAACCAGTAATCCTTTATT
GCTCGATAAAGCGCTAGAATTGGTTAAAATAATGAAGTTAAAATCTGCGGAACAAATTGCTGATTTAATGGACTTATCAA
GACAACTCGCTGAATTAAACTATGAGAGATATCAAAATTTTGATCTTAAAAACAACCCAATGAATCACTCTTATCCTGCT
TTGTTTTTATTTCAGGGAGATGTGTACCAAGGATTGAATGCTAATTCATGGAAAGATGAAGAGATCGAATACGCTCAATC
CCATTTAGGAATTTTGTCAGGGCTATATGGGTTTTTAAGGCCTTTAGATAGGATTCAACCTTACAGATTGGAGATGGGAG
TTAAGTTAGAAAATCCGGCAGGTAAGAATCTCTATGCATTTTGGAGCAAAATTGTTACTAATATTTTAAACCAAATACTA
GCAGAGCAGAGTAATCCTGTGCTTATTAACCTGGCTTCGACTGAGTATTTTAAAGTCGTGGATGAGAAAAAATTAAGTTA
TCCTCTTGTGACTATCAATTTTTATGAACAGAAAAATAGTGAATTAAAAATGATAGGTATCCTTGCTAAAAAAGCAAGAG
GAATGATGGCAAAGTATATAATGCAGAATAGAATAGACTCCATAGAACAAATTAAAGAGTTTTCTGAGTCAGGTTATTTA
TTTAATAAAGAAATTTCCAGTCCAAATAGTTTGAATTTTATTCGAATCCATTAA

Upstream 100 bases:

>100_bases
AGTCAGCGACAGTATTACAATTTTCATGCACAATCCTCGTGTCGGTATGGGCAAGGGCAGAAAGAAAAATATCAATTCTA
ATAAATAGAGCAGGTTATGT

Downstream 100 bases:

>100_bases
ATTATTTAAAAGGTATTTGATGTGGAATTTGTCCAGTCGGGTGCATGCCCTTAATCATTTCCCCAAGCAAGGTATAGAGT
GTTATGTTAAGAGAGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLTLLSPAKKLLSISKHYSKKTSNPLLLDKALELVKIMKLKSAEQIADLMDLSRQLAELNYERYQNFDLKNNPMNHSYPA
LFLFQGDVYQGLNANSWKDEEIEYAQSHLGILSGLYGFLRPLDRIQPYRLEMGVKLENPAGKNLYAFWSKIVTNILNQIL
AEQSNPVLINLASTEYFKVVDEKKLSYPLVTINFYEQKNSELKMIGILAKKARGMMAKYIMQNRIDSIEQIKEFSESGYL
FNKEISSPNSLNFIRIH

Sequences:

>Translated_257_residues
MLTLLSPAKKLLSISKHYSKKTSNPLLLDKALELVKIMKLKSAEQIADLMDLSRQLAELNYERYQNFDLKNNPMNHSYPA
LFLFQGDVYQGLNANSWKDEEIEYAQSHLGILSGLYGFLRPLDRIQPYRLEMGVKLENPAGKNLYAFWSKIVTNILNQIL
AEQSNPVLINLASTEYFKVVDEKKLSYPLVTINFYEQKNSELKMIGILAKKARGMMAKYIMQNRIDSIEQIKEFSESGYL
FNKEISSPNSLNFIRIH
>Mature_257_residues
MLTLLSPAKKLLSISKHYSKKTSNPLLLDKALELVKIMKLKSAEQIADLMDLSRQLAELNYERYQNFDLKNNPMNHSYPA
LFLFQGDVYQGLNANSWKDEEIEYAQSHLGILSGLYGFLRPLDRIQPYRLEMGVKLENPAGKNLYAFWSKIVTNILNQIL
AEQSNPVLINLASTEYFKVVDEKKLSYPLVTINFYEQKNSELKMIGILAKKARGMMAKYIMQNRIDSIEQIKEFSESGYL
FNKEISSPNSLNFIRIH

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=255, Percent_Identity=44.7058823529412, Blast_Score=220, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1317_LEGPL (Q5WWY2)

Other databases:

- EMBL:   CR628337
- RefSeq:   YP_126667.1
- STRING:   Q5WWY2
- GeneID:   3113637
- GenomeReviews:   CR628337_GR
- KEGG:   lpf:lpl1317
- NMPDR:   fig|297245.3.peg.2564
- LegioList:   lpl1317
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q5WWY2
- ProtClustDB:   PRK02101
- BioCyc:   LPNE297245:LPL1317-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29654; Mature: 29654

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLLSPAKKLLSISKHYSKKTSNPLLLDKALELVKIMKLKSAEQIADLMDLSRQLAELN
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YERYQNFDLKNNPMNHSYPALFLFQGDVYQGLNANSWKDEEIEYAQSHLGILSGLYGFLR
HHHHCCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLDRIQPYRLEMGVKLENPAGKNLYAFWSKIVTNILNQILAEQSNPVLINLASTEYFKVV
HHHHCCCEEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH
DEKKLSYPLVTINFYEQKNSELKMIGILAKKARGMMAKYIMQNRIDSIEQIKEFSESGYL
HHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FNKEISSPNSLNFIRIH
EEECCCCCCCCCEEEEC
>Mature Secondary Structure
MLTLLSPAKKLLSISKHYSKKTSNPLLLDKALELVKIMKLKSAEQIADLMDLSRQLAELN
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YERYQNFDLKNNPMNHSYPALFLFQGDVYQGLNANSWKDEEIEYAQSHLGILSGLYGFLR
HHHHCCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLDRIQPYRLEMGVKLENPAGKNLYAFWSKIVTNILNQILAEQSNPVLINLASTEYFKVV
HHHHCCCEEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH
DEKKLSYPLVTINFYEQKNSELKMIGILAKKARGMMAKYIMQNRIDSIEQIKEFSESGYL
HHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FNKEISSPNSLNFIRIH
EEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA