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The map label for this gene is recO [H]

Identifier: 54293918

GI number: 54293918

Start: 1093639

End: 1094328

Strand: Direct

Name: recO [H]

Synonym: lpl0974

Alternate gene names: 54293918

Gene position: 1093639-1094328 (Clockwise)

Preceding gene: 54293917

Following gene: 54293919

Centisome position: 32.69

GC content: 43.04

Gene sequence:

>690_bases
ATGACCAGTAAATCGCTGAGTGCTTGGGTAATTCATAAGCAATGGTCTGGAGATACCAGTGCCAGACTAAAGCTTTTTAC
TAGGGAACTGGGATTAATTAATTGCTTGTGCAAGGGAGGGCGAACTCCCAAGAAACAGTCATTACTTCAAGCTTTTATTC
CTCTGTGGGTTAGTATCGAAGAGCGTTATGATCAATATTACACACGAAACATTGAAAGCACTTCATCCAGACTGGATCTT
GAGGGACATTCTCTTTTTTCAGGCCTGTACATCAATGAGTTACTCTATTATACGCTGAGCCCGGATTTCCCCGACCCGGA
TTTATTTGATGCTTACTTGTTCACCTTAAATGGCATAGCATTAGCTAGAGAAAGAGAGGCGATAGAAGCTTTGCTGCGTC
GCTTTGAATGGGCTTTGCTTAAGGCTTGTGGATACACGTTTTCATTTCTTCATGAGGCGCGAACGGGAGAGTTAATTGTT
CCTGATTCTTATTACCAGTTTGTAGCTGGGGAGGGCTTTATTTTAGGTGGTGATAAAGAAATACCTGGTGAGCATTTACT
TGCTATAGCAGCAGATAATTTAAGCGAGCCCGCTTATTTAAAATCAGCGAAATTCATTATGCGTCAGGCAATCAATCATC
TTTTGGGTGGACGGGAAATCAAGGCCCGGTCCTTGTATGGACCGGCCTGA

Upstream 100 bases:

>100_bases
GACATGGAAAAAATGCTAGATAAAAAGGTTTTTTTACAATGTTGGTGTAAAGTGAAATCAGGCTGGTCAGATGATGAGAG
AATACTGAAGCAATTGGGAT

Downstream 100 bases:

>100_bases
GATAGTGGTATGGTCACCAAGTACCTCTATATTTTTGCTCAGTTTATTATGATTCAGGGAAGTGAGATCAGTGCCTATTA
TTCAGGCATCAGTTTGACTT

Product: DNA repair protein recO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTSKSLSAWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQYYTRNIESTSSRLDL
EGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAREREAIEALLRRFEWALLKACGYTFSFLHEARTGELIV
PDSYYQFVAGEGFILGGDKEIPGEHLLAIAADNLSEPAYLKSAKFIMRQAINHLLGGREIKARSLYGPA

Sequences:

>Translated_229_residues
MTSKSLSAWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQYYTRNIESTSSRLDL
EGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAREREAIEALLRRFEWALLKACGYTFSFLHEARTGELIV
PDSYYQFVAGEGFILGGDKEIPGEHLLAIAADNLSEPAYLKSAKFIMRQAINHLLGGREIKARSLYGPA
>Mature_228_residues
TSKSLSAWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQYYTRNIESTSSRLDLE
GHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAREREAIEALLRRFEWALLKACGYTFSFLHEARTGELIVP
DSYYQFVAGEGFILGGDKEIPGEHLLAIAADNLSEPAYLKSAKFIMRQAINHLLGGREIKARSLYGPA

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=224, Percent_Identity=34.8214285714286, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 25926; Mature: 25795

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKSLSAWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIE
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ERYDQYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHH
LAREREAIEALLRRFEWALLKACGYTFSFLHEARTGELIVPDSYYQFVAGEGFILGGDKE
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCHHHHHHCCCEEEECCCCC
IPGEHLLAIAADNLSEPAYLKSAKFIMRQAINHLLGGREIKARSLYGPA
CCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
TSKSLSAWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPLWVSIE
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ERYDQYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHH
LAREREAIEALLRRFEWALLKACGYTFSFLHEARTGELIVPDSYYQFVAGEGFILGGDKE
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCHHHHHHCCCEEEECCCCC
IPGEHLLAIAADNLSEPAYLKSAKFIMRQAINHLLGGREIKARSLYGPA
CCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA