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The map label for this gene is pnaB [H]

Identifier: 54293852

GI number: 54293852

Start: 1020286

End: 1020582

Strand: Reverse

Name: pnaB [H]

Synonym: lpl0908

Alternate gene names: 54293852

Gene position: 1020582-1020286 (Counterclockwise)

Preceding gene: 54293853

Following gene: 54293851

Centisome position: 30.5

GC content: 36.03

Gene sequence:

>297_bases
ATGCCTGAGATTCATACACTTGATAATCCTTATATTACAATATTAACCATTTTCGTACTGGCCTGTTTTGTAGGTTATTA
TGTGGTTTGGAAAGTAACACCAGCTTTACATACACCCCTAATGTCAGTAACCAATGCCATATCCAGTATTATTATACTTG
GTGCTTTAATCGCTGCAGGAAGCGAATTGATTGGAAGCATCACCTGGTTAGGTGGCATAGCCATATTTATTACTTCAATC
AATATTTTTGGTGGCTTTGTAGTAACTCAACGCATGCTTCGCATGTATAAAAAATAA

Upstream 100 bases:

>100_bases
GCTGAACTTAACTTAAATCCTGAAGATGAGATTATCCAGCAAGCCGTTCTTTGTCATAAAGGAACTTACCTGCCCTTTCA
AGGAGTAAAGGAGAAGCAAA

Downstream 100 bases:

>100_bases
TGATTTAAAGGACGGAATCAGTAATGAATTCAATAGTTCCACTGTTTTATTTATTGGCAGCCATTTGCTTTATATTGGCT
TTAAAAGGACTGGCCAGTCC

Product: NAD(P) transhydrogenase subunit beta (pyridine nucleotide transhydrogenase subunit alpha II)

Products: NA

Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 2; Proton-translocating transhydrogenase component 2; Pyridine nucleotide transhydrogenase subunit alpha 2; dII [H]

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MPEIHTLDNPYITILTIFVLACFVGYYVVWKVTPALHTPLMSVTNAISSIIILGALIAAGSELIGSITWLGGIAIFITSI
NIFGGFVVTQRMLRMYKK

Sequences:

>Translated_98_residues
MPEIHTLDNPYITILTIFVLACFVGYYVVWKVTPALHTPLMSVTNAISSIIILGALIAAGSELIGSITWLGGIAIFITSI
NIFGGFVVTQRMLRMYKK
>Mature_97_residues
PEIHTLDNPYITILTIFVLACFVGYYVVWKVTPALHTPLMSVTNAISSIIILGALIAAGSELIGSITWLGGIAIFITSIN
IFGGFVVTQRMLRMYKK

Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]

COG id: COG3288

COG function: function code C; NAD/NADP transhydrogenase alpha subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI122939155, Length=90, Percent_Identity=54.4444444444444, Blast_Score=94, Evalue=2e-20,
Organism=Homo sapiens, GI122939153, Length=90, Percent_Identity=54.4444444444444, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787887, Length=84, Percent_Identity=64.2857142857143, Blast_Score=108, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17550456, Length=93, Percent_Identity=53.763440860215, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =1.6.1.2 [H]

Molecular weight: Translated: 10732; Mature: 10601

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEIHTLDNPYITILTIFVLACFVGYYVVWKVTPALHTPLMSVTNAISSIIILGALIAAG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELIGSITWLGGIAIFITSINIFGGFVVTQRMLRMYKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEIHTLDNPYITILTIFVLACFVGYYVVWKVTPALHTPLMSVTNAISSIIILGALIAAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELIGSITWLGGIAIFITSINIFGGFVVTQRMLRMYKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8075801 [H]