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The map label for this gene is galE [H]

Identifier: 54293745

GI number: 54293745

Start: 904891

End: 905847

Strand: Direct

Name: galE [H]

Synonym: lpl0798

Alternate gene names: 54293745

Gene position: 904891-905847 (Clockwise)

Preceding gene: 54293744

Following gene: 54293746

Centisome position: 27.05

GC content: 33.65

Gene sequence:

>957_bases
GTGGCAAAAATATTAATTACCGGCGCGACAGGATTTATAGGACGAAGTTTAGTACCTGCTTTGCTTTCTGAAGGACATGA
TGTGCGTTGTGCTGTTTTGCAGCTGGATAGTACATTACAAGCAGAACAAATAGTAATAAACAATCTTGAGGTCCACACTG
ATTGGACTGATGCTTTGCGGAATGTGGAAATAGTCATTCATTTAGCTGCCAGAGTTCACATAATGAAAGAATATGTAACA
TCTTGTTTAGACGAATATTGCAAAATTAATAGTATTGCTACAAAAAATTTTGCTGAGCAGGCAGCCCAAAATAATGTAAA
GCGATTTATATTTCTTAGTACCATAAAAGTACATGGCGAATTTTCACAAAATAGTCTGCCATTTTCTGAAGATTGTAGGA
CTCAACCTGAAGATCCCTATGCAAAAAGTAAGCTGTTTGCTGAACAATATATACAAGAAATTTGCCAGAATACCCGGATG
GATTTTGTTATATTAAGACCACCATTAGTTTATGGACCTTATGTAAAGGCTAATTTTCTCAAAATGTTACAACTTGTTGA
TAAGAAATGGCCTTTGCCTTTCGGCAGTATTTATAATAAACGAACTTTTATTTATATTGATAATTTGGTTTCAGCAATAA
GTGCAGTTGTCAGGGAGCCTAATGCCGCTAACCAAATTTATTTGGTAGCAGATGATGTTTCATGGTCATTAACACAACTG
ATGCAAACCTTATCGCGCAGGATGAATGTAAAATTATTTTTAATCCCCATCCCAGTTCAAATTTTAATTTTCCTATTTAA
ATTATGCGGACTCAAAAATATTAATACAAGATTGTTTTCTTCTTTAGAAGTAAGTAATAAGAAAATTAAATCTCAATTAG
GGTGGACACCACCAGTTAGTTCTGTTGAAGGATTAGAAAAGACGGTAAAATGGTATCAAAATGAATATAATACTTAA

Upstream 100 bases:

>100_bases
TACTGTGCAGGGCTAGAGAACTTAATAAAAGTAGTTACGGTCAATATCTTGCAGAACTGCTTAATCATAAACGATATTAA
TTTTTTCAGGTTATAAAGTA

Downstream 100 bases:

>100_bases
TGTATTTTTAATATTTATCTCAGCAATTTTGACTAAATTATTTGCCTTGTTTGCGCAGCATACAAAATTGATTGATATTC
CAAATGAAAGAAATTTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALRNVEIVIHLAARVHIMKEYVT
SCLDEYCKINSIATKNFAEQAAQNNVKRFIFLSTIKVHGEFSQNSLPFSEDCRTQPEDPYAKSKLFAEQYIQEICQNTRM
DFVILRPPLVYGPYVKANFLKMLQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVREPNAANQIYLVADDVSWSLTQL
MQTLSRRMNVKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNKKIKSQLGWTPPVSSVEGLEKTVKWYQNEYNT

Sequences:

>Translated_318_residues
MAKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALRNVEIVIHLAARVHIMKEYVT
SCLDEYCKINSIATKNFAEQAAQNNVKRFIFLSTIKVHGEFSQNSLPFSEDCRTQPEDPYAKSKLFAEQYIQEICQNTRM
DFVILRPPLVYGPYVKANFLKMLQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVREPNAANQIYLVADDVSWSLTQL
MQTLSRRMNVKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNKKIKSQLGWTPPVSSVEGLEKTVKWYQNEYNT
>Mature_317_residues
AKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALRNVEIVIHLAARVHIMKEYVTS
CLDEYCKINSIATKNFAEQAAQNNVKRFIFLSTIKVHGEFSQNSLPFSEDCRTQPEDPYAKSKLFAEQYIQEICQNTRMD
FVILRPPLVYGPYVKANFLKMLQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVREPNAANQIYLVADDVSWSLTQLM
QTLSRRMNVKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNKKIKSQLGWTPPVSSVEGLEKTVKWYQNEYNT

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657641, Length=342, Percent_Identity=25.7309941520468, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI87081792, Length=342, Percent_Identity=22.5146198830409, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17568069, Length=342, Percent_Identity=25.4385964912281, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71987463, Length=324, Percent_Identity=25.3086419753086, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 36269; Mature: 36137

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALR
CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCEEEECCHHHHHC
NVEIVIHLAARVHIMKEYVTSCLDEYCKINSIATKNFAEQAAQNNVKRFIFLSTIKVHGE
CHHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEEEEEEEEEECC
FSQNSLPFSEDCRTQPEDPYAKSKLFAEQYIQEICQNTRMDFVILRPPLVYGPYVKANFL
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCHHHHHH
KMLQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVREPNAANQIYLVADDVSWSLTQL
HHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
MQTLSRRMNVKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNKKIKSQLGWTPPVS
HHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
SVEGLEKTVKWYQNEYNT
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKILITGATGFIGRSLVPALLSEGHDVRCAVLQLDSTLQAEQIVINNLEVHTDWTDALR
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCEEEECCHHHHHC
NVEIVIHLAARVHIMKEYVTSCLDEYCKINSIATKNFAEQAAQNNVKRFIFLSTIKVHGE
CHHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEEEEEEEEEECC
FSQNSLPFSEDCRTQPEDPYAKSKLFAEQYIQEICQNTRMDFVILRPPLVYGPYVKANFL
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCHHHHHH
KMLQLVDKKWPLPFGSIYNKRTFIYIDNLVSAISAVVREPNAANQIYLVADDVSWSLTQL
HHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
MQTLSRRMNVKLFLIPIPVQILIFLFKLCGLKNINTRLFSSLEVSNKKIKSQLGWTPPVS
HHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
SVEGLEKTVKWYQNEYNT
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]