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The map label for this gene is hslR [H]

Identifier: 54027568

GI number: 54027568

Start: 5933749

End: 5934144

Strand: Reverse

Name: hslR [H]

Synonym: nfa55940

Alternate gene names: 54027568

Gene position: 5934144-5933749 (Counterclockwise)

Preceding gene: 54027569

Following gene: 54027566

Centisome position: 98.55

GC content: 71.46

Gene sequence:

>396_bases
GTGCCGCACCGAGAACACGACGCACCGACGCAGGCCAGGGTCGATTCCTGGACGTGGTCGGTGCGGCTGTTCAAGACCCG
GTCCGCGGCAGCCGAAGCCTGCCGCGGTGGTCACGTCCGAGTCAACGGGGCCACCGCGAAACCGGCGCAGCCGGTCCGCC
CGGGTGACGAGGTGCGTATCCGAGTCGGCGGCACCGAGCGCATCGTGATCGTCGAGCGGATCGTCACCAAACGGGTCGGT
GCTCCGATCGCCGCCCAATGCCTGATCGACCGCAGTCCGCCGCCTCCGCCGAAGGAACTCCTCGCCGCCATGCCGCGGCG
CGACCGCGGGTCCGGTCGGCCCACGAAACGGGAACGCCGCGAGACCGATCGCCTGCTCGGTCGCCGCGACTCCTGA

Upstream 100 bases:

>100_bases
CTCCTCAACGCGGTGCAGTCCGGTCAGCCGGTGTCCTACACCCCGCTGCGCCCCGACATGGTCGTCACCGCGCGCCGCAT
CGCCGACTAATCTGGATCGG

Downstream 100 bases:

>100_bases
ATTTCCTCATTCGATCTCCCCGCTCCCGATCAGCAGATGCGGCACGCGGTGGCGCAGCGCCGCCCCGAGCAGCTCCGCAC
CGCGCCGAACGGCCGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPHREHDAPTQARVDSWTWSVRLFKTRSAAAEACRGGHVRVNGATAKPAQPVRPGDEVRIRVGGTERIVIVERIVTKRVG
APIAAQCLIDRSPPPPPKELLAAMPRRDRGSGRPTKRERRETDRLLGRRDS

Sequences:

>Translated_131_residues
MPHREHDAPTQARVDSWTWSVRLFKTRSAAAEACRGGHVRVNGATAKPAQPVRPGDEVRIRVGGTERIVIVERIVTKRVG
APIAAQCLIDRSPPPPPKELLAAMPRRDRGSGRPTKRERRETDRLLGRRDS
>Mature_130_residues
PHREHDAPTQARVDSWTWSVRLFKTRSAAAEACRGGHVRVNGATAKPAQPVRPGDEVRIRVGGTERIVIVERIVTKRVGA
PIAAQCLIDRSPPPPPKELLAAMPRRDRGSGRPTKRERRETDRLLGRRDS

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=124, Percent_Identity=34.6774193548387, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14596; Mature: 14465

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHREHDAPTQARVDSWTWSVRLFKTRSAAAEACRGGHVRVNGATAKPAQPVRPGDEVRI
CCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEE
RVGGTERIVIVERIVTKRVGAPIAAQCLIDRSPPPPPKELLAAMPRRDRGSGRPTKRERR
EECCCCEEEHHHHHHHHHCCCCCEEHEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
ETDRLLGRRDS
HHHHHHCCCCC
>Mature Secondary Structure 
PHREHDAPTQARVDSWTWSVRLFKTRSAAAEACRGGHVRVNGATAKPAQPVRPGDEVRI
CCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEE
RVGGTERIVIVERIVTKRVGAPIAAQCLIDRSPPPPPKELLAAMPRRDRGSGRPTKRERR
EECCCCEEEHHHHHHHHHCCCCCEEHEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH
ETDRLLGRRDS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]