Click here to switch to the map view.

The map label for this gene is 54027566

Identifier: 54027566

GI number: 54027566

Start: 5928157

End: 5929173

Strand: Reverse

Name: 54027566

Synonym: nfa55920

Alternate gene names: NA

Gene position: 5929173-5928157 (Counterclockwise)

Preceding gene: 54027568

Following gene: 54027564

Centisome position: 98.47

GC content: 73.94

Gene sequence:

>1017_bases
GTGTCGCGGCGGCCCTACCCGTGGTGGCGCCGATCGCCTACCGTGGCATCCGTGCCCGACTCCGAACTCGCGCCACGGGC
GGTGCGTACTCCCACGCTGCCCACCGTGTTGCGCTGCTGCACCGCCCTGGCGGCCACCCCACCGCGGCTGCTCCGTCCGC
GTCGCCCCGACCGGGCGCTGCTCGCCGGCATCACCCTGGCCGATCCCCCGCCCGCGCGGGCCGAGGTGCGGCTCACGGCA
CTGACCCAGGCACGCACGTCGGCGCCGGAGATCCTCGTGGCCGAGGGGGTACGCAGCCTGCGCGAGGTGCCGATGACCTA
CGCCGCGTTCCTGGTGGAACATCCCCGCGCGCGGTTCCTCGTCGACCCCGCGATGTGCGCCGAGGCGCAGCGGCGGGTGC
TGCGCGAACTGCCGTTCCCGGTGCCGCTGCTGGTGGGACCGGAGAAGCCGGTGCGCGGCCTGGCCGACGCGCTCGCGGCC
GTCGGAATGACCGGTGACGACGTGGATTTCGTGATCGCCACCCATCTGCACTGGGATCACGTGGCCGGTCTGCTCGAGCT
GCCCGGCTCGGTGCCGATCCGGCTGCCCGCGATCGAACGGGACTGGGCGATGGATGGCCCGCGCGCGCCACTGGGGGTGG
CACGGGGTCCGCTGCTCGGCCGCGAATTCGACACCGTCGAACTCGACGGTCCGCCCGTGCTGAGCTTCGCGCGCAGCAGG
GATCTGTTCGGCGACGGCTCGGTGCTGCTGGTCGACCTGGCCGGGCACACGCCGGGCAGCATCGGGGTGCTGCTCGCCGT
CGACGACGGCACCCGCGTGCTGCTGGCCGGTGACGCGGTGTGGAGCAACCTGCAAGTTCGCCTGTTGCGCGAGAAGGCCC
CCATGCCCGGCCTGCTCTTCGACGCCGACCGCGAAGCCGCGTTCGCCACCATCCACCGCCTGCACGCGCTCCCCGCCGCG
ATCGAGATCATCGCCGCCCACGACCACGCCGCCGTCGTGGCCCGGGCGCGCGGCTGA

Upstream 100 bases:

>100_bases
TCCCCCGCGATTATGCCGCACCCCCGGCCCGCCCGGCAGGCGTCTTCGCCTGTGCCCGTTGCCCTTTCGCGACACGCCGC
GATCCGACCGGAGCTGTCGC

Downstream 100 bases:

>100_bases
GCCAGGCGCGCCCGGGGGCCGAGCGAACCGATCAGGCCACGACGACGTCGGCCAGCCGGGATCGGATCAGCTGCTCGGCC
TCTTCGACCATCCGGCCGAT

Product: putative hydrolase

Products: NA

Alternate protein names: GumP Protein; Signal Peptide; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Hydrolase

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSRRPYPWWRRSPTVASVPDSELAPRAVRTPTLPTVLRCCTALAATPPRLLRPRRPDRALLAGITLADPPPARAEVRLTA
LTQARTSAPEILVAEGVRSLREVPMTYAAFLVEHPRARFLVDPAMCAEAQRRVLRELPFPVPLLVGPEKPVRGLADALAA
VGMTGDDVDFVIATHLHWDHVAGLLELPGSVPIRLPAIERDWAMDGPRAPLGVARGPLLGREFDTVELDGPPVLSFARSR
DLFGDGSVLLVDLAGHTPGSIGVLLAVDDGTRVLLAGDAVWSNLQVRLLREKAPMPGLLFDADREAAFATIHRLHALPAA
IEIIAAHDHAAVVARARG

Sequences:

>Translated_338_residues
MSRRPYPWWRRSPTVASVPDSELAPRAVRTPTLPTVLRCCTALAATPPRLLRPRRPDRALLAGITLADPPPARAEVRLTA
LTQARTSAPEILVAEGVRSLREVPMTYAAFLVEHPRARFLVDPAMCAEAQRRVLRELPFPVPLLVGPEKPVRGLADALAA
VGMTGDDVDFVIATHLHWDHVAGLLELPGSVPIRLPAIERDWAMDGPRAPLGVARGPLLGREFDTVELDGPPVLSFARSR
DLFGDGSVLLVDLAGHTPGSIGVLLAVDDGTRVLLAGDAVWSNLQVRLLREKAPMPGLLFDADREAAFATIHRLHALPAA
IEIIAAHDHAAVVARARG
>Mature_337_residues
SRRPYPWWRRSPTVASVPDSELAPRAVRTPTLPTVLRCCTALAATPPRLLRPRRPDRALLAGITLADPPPARAEVRLTAL
TQARTSAPEILVAEGVRSLREVPMTYAAFLVEHPRARFLVDPAMCAEAQRRVLRELPFPVPLLVGPEKPVRGLADALAAV
GMTGDDVDFVIATHLHWDHVAGLLELPGSVPIRLPAIERDWAMDGPRAPLGVARGPLLGREFDTVELDGPPVLSFARSRD
LFGDGSVLLVDLAGHTPGSIGVLLAVDDGTRVLLAGDAVWSNLQVRLLREKAPMPGLLFDADREAAFATIHRLHALPAAI
EIIAAHDHAAVVARARG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36445; Mature: 36314

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRPYPWWRRSPTVASVPDSELAPRAVRTPTLPTVLRCCTALAATPPRLLRPRRPDRAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHH
LAGITLADPPPARAEVRLTALTQARTSAPEILVAEGVRSLREVPMTYAAFLVEHPRARFL
EEEEEECCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE
VDPAMCAEAQRRVLRELPFPVPLLVGPEKPVRGLADALAAVGMTGDDVDFVIATHLHWDH
ECHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHH
VAGLLELPGSVPIRLPAIERDWAMDGPRAPLGVARGPLLGREFDTVELDGPPVLSFARSR
HHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCC
DLFGDGSVLLVDLAGHTPGSIGVLLAVDDGTRVLLAGDAVWSNLQVRLLREKAPMPGLLF
CCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCHHHCCHHEEEEHHCCCCCCEEE
DADREAAFATIHRLHALPAAIEIIAAHDHAAVVARARG
ECCCHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
SRRPYPWWRRSPTVASVPDSELAPRAVRTPTLPTVLRCCTALAATPPRLLRPRRPDRAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHH
LAGITLADPPPARAEVRLTALTQARTSAPEILVAEGVRSLREVPMTYAAFLVEHPRARFL
EEEEEECCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE
VDPAMCAEAQRRVLRELPFPVPLLVGPEKPVRGLADALAAVGMTGDDVDFVIATHLHWDH
ECHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHH
VAGLLELPGSVPIRLPAIERDWAMDGPRAPLGVARGPLLGREFDTVELDGPPVLSFARSR
HHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCC
DLFGDGSVLLVDLAGHTPGSIGVLLAVDDGTRVLLAGDAVWSNLQVRLLREKAPMPGLLF
CCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCHHHCCHHEEEEHHCCCCCCEEE
DADREAAFATIHRLHALPAAIEIIAAHDHAAVVARARG
ECCCHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA