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The map label for this gene is 54027544

Identifier: 54027544

GI number: 54027544

Start: 5904875

End: 5905837

Strand: Reverse

Name: 54027544

Synonym: nfa55700

Alternate gene names: NA

Gene position: 5905837-5904875 (Counterclockwise)

Preceding gene: 54027545

Following gene: 54027541

Centisome position: 98.08

GC content: 70.4

Gene sequence:

>963_bases
ATGCTTCAGTTACGGGTTCTCTCACCCGCCGCGCTGACCGACGGGGTGCTCTCGGTGTTGAACGAGGATCCGGCCGTGAG
CGGTCTGGCCTTGATGCGCGGCGCCGCGCTGAAACCGCCCGGCGACATGATCTTCGCCGAAGTGGCGCGGGAGGCGGGCA
ACGACGTGGTCGAGCGGTTGCGCGCCCTGGGGGTGCACAAGCAGGGCAGTATCGAACTCGACCAGGTCCGGACGTGGATG
TCGCGCAGCGGTTTCGAGGCCGAGGTGCGCACCCCGGGCAGCAGCGCCGACTCGGTGGTGTGGGCCGAGGTGGCGCAGCG
CTCCTACGAGGAGTCCGAGCTGAACTGGACCTACCTGAGCTTCATGACGCTGGCCACGATCATCGCCGCGATCGCGATCG
TGCACGATTCCCAGATCCTGGTGATCGGCGCGATGGTGCTCGGCCCGGAGTTCGGCGCCATCGCCGCGCTCGGCGTCGCA
CTGGTCCGTCGGAGGTACGTGCTGCTGCGGCTGGCCCTGCGCACGCTGGTCGCCGGGTTCACGGTCGCCATCCTGGTGAC
CTTGGCGCTGGCGTTGCTGGCCAGAGCCCTTGGCTGGATCACCGAGGGTGACGTGACCGGCCCGCGCCCGAGCACGGCGT
TCATCTACACCCCGGACCGCTGGTCGTTCATCGTCGCGGTGGTGGCGGCCGCGGCCGGGGTGCTGGCGCTGACCTCGGCC
AAGGCCAGCGGCCTGACCGGTGTGTTCATCTCGGTGACCACGGTGCCCGCCGCCGGCAACATCGCGCTCGGCGCGGCGTT
CGGCGTGAGCGAGGCGGTCTGGGGCAGCCTGGCGCAGCTGCTGGTGAACCTGTCGGGCATGGCGCTGGCCGGCTGGGCGA
CGCTGGCGCTACAGCAGGCGGTGTGGACGCGGATCGCCATCCGCCGCGCGAAGGCGCTGCACCTGCCGTACCGGATGCTC
TAG

Upstream 100 bases:

>100_bases
GCCGGCGCGGCGGTCGGCGCGGGCGCCCGAACTCGTCTCGGCCGCCTGATGTTTCGCGTCGTGCCGCGCGGTGGTCACGG
GCGCACGGCAGACTGAACCG

Downstream 100 bases:

>100_bases
CGCGGTCGGTGATCAGCGAAACGGCCCCCTCCCGTTCGGAAGGGGGCCGTTTCGTCGGGCCGGATTCGCTCGGGCTCAGC
CCACCGGGGTGACGGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLQLRVLSPAALTDGVLSVLNEDPAVSGLALMRGAALKPPGDMIFAEVAREAGNDVVERLRALGVHKQGSIELDQVRTWM
SRSGFEAEVRTPGSSADSVVWAEVAQRSYEESELNWTYLSFMTLATIIAAIAIVHDSQILVIGAMVLGPEFGAIAALGVA
LVRRRYVLLRLALRTLVAGFTVAILVTLALALLARALGWITEGDVTGPRPSTAFIYTPDRWSFIVAVVAAAAGVLALTSA
KASGLTGVFISVTTVPAAGNIALGAAFGVSEAVWGSLAQLLVNLSGMALAGWATLALQQAVWTRIAIRRAKALHLPYRML

Sequences:

>Translated_320_residues
MLQLRVLSPAALTDGVLSVLNEDPAVSGLALMRGAALKPPGDMIFAEVAREAGNDVVERLRALGVHKQGSIELDQVRTWM
SRSGFEAEVRTPGSSADSVVWAEVAQRSYEESELNWTYLSFMTLATIIAAIAIVHDSQILVIGAMVLGPEFGAIAALGVA
LVRRRYVLLRLALRTLVAGFTVAILVTLALALLARALGWITEGDVTGPRPSTAFIYTPDRWSFIVAVVAAAAGVLALTSA
KASGLTGVFISVTTVPAAGNIALGAAFGVSEAVWGSLAQLLVNLSGMALAGWATLALQQAVWTRIAIRRAKALHLPYRML
>Mature_320_residues
MLQLRVLSPAALTDGVLSVLNEDPAVSGLALMRGAALKPPGDMIFAEVAREAGNDVVERLRALGVHKQGSIELDQVRTWM
SRSGFEAEVRTPGSSADSVVWAEVAQRSYEESELNWTYLSFMTLATIIAAIAIVHDSQILVIGAMVLGPEFGAIAALGVA
LVRRRYVLLRLALRTLVAGFTVAILVTLALALLARALGWITEGDVTGPRPSTAFIYTPDRWSFIVAVVAAAAGVLALTSA
KASGLTGVFISVTTVPAAGNIALGAAFGVSEAVWGSLAQLLVNLSGMALAGWATLALQQAVWTRIAIRRAKALHLPYRML

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33754; Mature: 33754

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLRVLSPAALTDGVLSVLNEDPAVSGLALMRGAALKPPGDMIFAEVAREAGNDVVERL
CEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHH
RALGVHKQGSIELDQVRTWMSRSGFEAEVRTPGSSADSVVWAEVAQRSYEESELNWTYLS
HHHCCCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHCCCHHHHH
FMTLATIIAAIAIVHDSQILVIGAMVLGPEFGAIAALGVALVRRRYVLLRLALRTLVAGF
HHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAILVTLALALLARALGWITEGDVTGPRPSTAFIYTPDRWSFIVAVVAAAAGVLALTSA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
KASGLTGVFISVTTVPAAGNIALGAAFGVSEAVWGSLAQLLVNLSGMALAGWATLALQQA
CCCCCCEEEEEEEECCCCCCEEEEHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VWTRIAIRRAKALHLPYRML
HHHHHHHHHHHHHCCCHHCC
>Mature Secondary Structure
MLQLRVLSPAALTDGVLSVLNEDPAVSGLALMRGAALKPPGDMIFAEVAREAGNDVVERL
CEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHH
RALGVHKQGSIELDQVRTWMSRSGFEAEVRTPGSSADSVVWAEVAQRSYEESELNWTYLS
HHHCCCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHCCCHHHHH
FMTLATIIAAIAIVHDSQILVIGAMVLGPEFGAIAALGVALVRRRYVLLRLALRTLVAGF
HHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAILVTLALALLARALGWITEGDVTGPRPSTAFIYTPDRWSFIVAVVAAAAGVLALTSA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
KASGLTGVFISVTTVPAAGNIALGAAFGVSEAVWGSLAQLLVNLSGMALAGWATLALQQA
CCCCCCEEEEEEEECCCCCCEEEEHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VWTRIAIRRAKALHLPYRML
HHHHHHHHHHHHHCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA