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The map label for this gene is 54027545

Identifier: 54027545

GI number: 54027545

Start: 5905889

End: 5907268

Strand: Reverse

Name: 54027545

Synonym: nfa55710

Alternate gene names: NA

Gene position: 5907268-5905889 (Counterclockwise)

Preceding gene: 54027555

Following gene: 54027544

Centisome position: 98.11

GC content: 71.3

Gene sequence:

>1380_bases
ATGCCGACCGGAACCGCTGTCAGCGAGTTGCCCGCCGGCCGCGTGATCCGGCGCACCGCGATGACCGCGGTGGTGCTGCT
GCTGTGCGGCCTGACCCTGGTGCCGGCCTACCTGAACAAGGCACGATGCGCGGGCGCGCCGTTCTACGAGGACGGGCGCA
GCGTCGCCTTCGACATCGTCAAGGACGCCGAGGTCTGCTACTCCGACATCCAGTACCTGTGGCTCGGCCGCGACATCGAT
CGGCACGTGTTCCCCTACATCGACGGCGGGATCACCGCCGACGGCTGGCTGACCGGCGGCGCGGTGGAGTATCCGGTGCT
CAGCGGACTGTTGATGTGGCTGGGCGCGATCGGTGCCCACGACGACGCCGCCTTCCTGTGGCATTCGGCGCTGCTGCTCG
CGCCGTTCGCGCTGTTGACCGCGTGGATGCTGGCCCGGCTGGCGGGCCGGGCCGCGCTGCTGTGGGCGGCCGGGCCGCCG
CTGGTGCTCTACGCCTTCCACAACTGGGAACTGCCGGTGGTGTGCACCGCGGTCGCGGCGGTGTACGTGATGACCGCGCT
GACGCGATATTCGCTGCGCACCCGGGGCATTGTCGCGGCGGTGCTGCTCGGCCTCGGGTTCTGCCTGAAGCTGTATCCGG
GGATCTTCGTGCTGCCCCTGGTCCTGCTGGTGCTCACCCGGGGAAAGGCCGGGCCGCGCGAGCGCGCGGAGTCCGGCTGG
GATGTGCGCGGCGCCGCGCTGACCGCGGGCGCGGCGGTGGCGACGGTGGTGCTGGTGAACCTGCCGTTCGCGGTGGCCGG
GTACGAGGGGTGGCGCGCCTCGATCACCTTCCAGCAGCGGCGTCAGGCCGACATCACCACCAACTCCATCTGGTACTGGG
GGCATCACCTGCTGTTCGGGCGGTTCGCCGAGACCGGGCAGGCGTGGCAGGACGGTGTGGCGCTGGCCTCGCCGCTGCTG
GTCGCCGCCACTTTCGCGGTGGCGGCATGGCTGGGCTGGCGGCGATACGCCGCGGGCGAGGTGTACCCGTGGGTGGGGGT
GAGCGCGGCGATGCTGTGCGGCTTCCTGGTTTTCCACAAGGTGCACTCGCCGCAGTACACGCTGTGGCTGGTCCCGTTCT
TCGTGCTGCTCGCGGTGCCGTGGCCGCTGGTGGTGGCGTATCTGTGCGCCGACATCGCGATCGGCGTCGGGGTGTTCCGG
TACTTCTATCTGCTCGGTGCGGGCGAGCCGAGCGAATGGGCCGAGGTGGTGGTGCAATTCGGCGTGTGGGGGCGCGCGCT
GCTGCTGGTGCCGTTGTTCTTCCTGTTCGTGCGGGCGGCCCCGCGCGGCACGCCGGCGCGGCGGTCGGCGCGGGCGCCCG
AACTCGTCTCGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGACAAGGCTACATGAGGGGGTCCTGAGCAGCGAAATCGCCCCGTGACCGGCGCCGCTGGGCCCGGCGGCCCGCCCCGG
CTCCGCCTAGGGTGGTCGAC

Downstream 100 bases:

>100_bases
TGTTTCGCGTCGTGCCGCGCGGTGGTCACGGGCGCACGGCAGACTGAACCGATGCTTCAGTTACGGGTTCTCTCACCCGC
CGCGCTGACCGACGGGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MPTGTAVSELPAGRVIRRTAMTAVVLLLCGLTLVPAYLNKARCAGAPFYEDGRSVAFDIVKDAEVCYSDIQYLWLGRDID
RHVFPYIDGGITADGWLTGGAVEYPVLSGLLMWLGAIGAHDDAAFLWHSALLLAPFALLTAWMLARLAGRAALLWAAGPP
LVLYAFHNWELPVVCTAVAAVYVMTALTRYSLRTRGIVAAVLLGLGFCLKLYPGIFVLPLVLLVLTRGKAGPRERAESGW
DVRGAALTAGAAVATVVLVNLPFAVAGYEGWRASITFQQRRQADITTNSIWYWGHHLLFGRFAETGQAWQDGVALASPLL
VAATFAVAAWLGWRRYAAGEVYPWVGVSAAMLCGFLVFHKVHSPQYTLWLVPFFVLLAVPWPLVVAYLCADIAIGVGVFR
YFYLLGAGEPSEWAEVVVQFGVWGRALLLVPLFFLFVRAAPRGTPARRSARAPELVSAA

Sequences:

>Translated_459_residues
MPTGTAVSELPAGRVIRRTAMTAVVLLLCGLTLVPAYLNKARCAGAPFYEDGRSVAFDIVKDAEVCYSDIQYLWLGRDID
RHVFPYIDGGITADGWLTGGAVEYPVLSGLLMWLGAIGAHDDAAFLWHSALLLAPFALLTAWMLARLAGRAALLWAAGPP
LVLYAFHNWELPVVCTAVAAVYVMTALTRYSLRTRGIVAAVLLGLGFCLKLYPGIFVLPLVLLVLTRGKAGPRERAESGW
DVRGAALTAGAAVATVVLVNLPFAVAGYEGWRASITFQQRRQADITTNSIWYWGHHLLFGRFAETGQAWQDGVALASPLL
VAATFAVAAWLGWRRYAAGEVYPWVGVSAAMLCGFLVFHKVHSPQYTLWLVPFFVLLAVPWPLVVAYLCADIAIGVGVFR
YFYLLGAGEPSEWAEVVVQFGVWGRALLLVPLFFLFVRAAPRGTPARRSARAPELVSAA
>Mature_458_residues
PTGTAVSELPAGRVIRRTAMTAVVLLLCGLTLVPAYLNKARCAGAPFYEDGRSVAFDIVKDAEVCYSDIQYLWLGRDIDR
HVFPYIDGGITADGWLTGGAVEYPVLSGLLMWLGAIGAHDDAAFLWHSALLLAPFALLTAWMLARLAGRAALLWAAGPPL
VLYAFHNWELPVVCTAVAAVYVMTALTRYSLRTRGIVAAVLLGLGFCLKLYPGIFVLPLVLLVLTRGKAGPRERAESGWD
VRGAALTAGAAVATVVLVNLPFAVAGYEGWRASITFQQRRQADITTNSIWYWGHHLLFGRFAETGQAWQDGVALASPLLV
AATFAVAAWLGWRRYAAGEVYPWVGVSAAMLCGFLVFHKVHSPQYTLWLVPFFVLLAVPWPLVVAYLCADIAIGVGVFRY
FYLLGAGEPSEWAEVVVQFGVWGRALLLVPLFFLFVRAAPRGTPARRSARAPELVSAA

Specific function: Unknown

COG id: COG5650

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49811; Mature: 49680

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGTAVSELPAGRVIRRTAMTAVVLLLCGLTLVPAYLNKARCAGAPFYEDGRSVAFDIV
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHH
KDAEVCYSDIQYLWLGRDIDRHVFPYIDGGITADGWLTGGAVEYPVLSGLLMWLGAIGAH
HHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DDAAFLWHSALLLAPFALLTAWMLARLAGRAALLWAAGPPLVLYAFHNWELPVVCTAVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHHHHHHHH
VYVMTALTRYSLRTRGIVAAVLLGLGFCLKLYPGIFVLPLVLLVLTRGKAGPRERAESGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCC
DVRGAALTAGAAVATVVLVNLPFAVAGYEGWRASITFQQRRQADITTNSIWYWGHHLLFG
CCCCHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHH
RFAETGQAWQDGVALASPLLVAATFAVAAWLGWRRYAAGEVYPWVGVSAAMLCGFLVFHK
HHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VHSPQYTLWLVPFFVLLAVPWPLVVAYLCADIAIGVGVFRYFYLLGAGEPSEWAEVVVQF
HCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GVWGRALLLVPLFFLFVRAAPRGTPARRSARAPELVSAA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHCCC
>Mature Secondary Structure 
PTGTAVSELPAGRVIRRTAMTAVVLLLCGLTLVPAYLNKARCAGAPFYEDGRSVAFDIV
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHH
KDAEVCYSDIQYLWLGRDIDRHVFPYIDGGITADGWLTGGAVEYPVLSGLLMWLGAIGAH
HHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DDAAFLWHSALLLAPFALLTAWMLARLAGRAALLWAAGPPLVLYAFHNWELPVVCTAVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHHHHHHHH
VYVMTALTRYSLRTRGIVAAVLLGLGFCLKLYPGIFVLPLVLLVLTRGKAGPRERAESGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCC
DVRGAALTAGAAVATVVLVNLPFAVAGYEGWRASITFQQRRQADITTNSIWYWGHHLLFG
CCCCHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHH
RFAETGQAWQDGVALASPLLVAATFAVAAWLGWRRYAAGEVYPWVGVSAAMLCGFLVFHK
HHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VHSPQYTLWLVPFFVLLAVPWPLVVAYLCADIAIGVGVFRYFYLLGAGEPSEWAEVVVQF
HCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GVWGRALLLVPLFFLFVRAAPRGTPARRSARAPELVSAA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA