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The map label for this gene is betI [C]

Identifier: 54027300

GI number: 54027300

Start: 5628555

End: 5629202

Strand: Reverse

Name: betI [C]

Synonym: nfa53260

Alternate gene names: 54027300

Gene position: 5629202-5628555 (Counterclockwise)

Preceding gene: 54027301

Following gene: 54027299

Centisome position: 93.49

GC content: 71.45

Gene sequence:

>648_bases
ATGACGATCATGGCGACACCCCACGAACCCAAGCAGGACCGCAGCCGCGCCACCCGGCAGCGGCTGCTCGAGGCGACCAT
CGACTGCCTGGCCGAGATGGGCTGGGCCGCCGCCACGGTCGCCGTGGTCGCCGAACGGGCCGGGGTGTCGCGCGGCGCGG
CCCAGCACCACTTCCCGACCAGGGAAGATCTCATCACGGCCGCGCTCGAGTACATGTTCGACACCAGGAACGAGCAGGCC
AGGCGCGAAGCCGAGGCCATGTCCGAGCAGCTCGACGGCATCGCCCGCACCGAAGCCGTGGTCGAGGGCCTGGTCGAGTC
CTACACCAGCCCGCTGTTCAAGGCCGCCCTCCAGGTGTGGACCCACGCCGCCGCCGACCCGGTGCTCCGCGAACGCATCG
TCCCCCTGGAAGCCAAATTCGGCCGCGCCTCCCACCGCCGCGCCGTCGAAGCCCTGGGCGTCGACGACTCCGACCCCGTC
GCCCACCACCTCGTCCAAGCCACCCTCGACCTGGCCCGCGGACTCGGCCTCGCGGACGTCCTCACCGACGACTCCGCCCG
GCGCAAGCAGATCATCCACCAGTGGGCCGTCACCCTGCACTCGGCACTGCACACGGGTGTGGTGTCCGTGGCCGCGGAAC
CGGCGTAA

Upstream 100 bases:

>100_bases
CCGAGGAACTGGCGCAACGCTCGGCGAGCTTCTTCGGCACCCCCGAGGTGCGCGAGGGCATGACGGCCTTCCTGCAACGC
CGCCCGCCCACCTGGGCAGA

Downstream 100 bases:

>100_bases
CTCCTGGTTGTCGCCCACGGCGCAACGCAGGCCGTCTTCGAATGGCCGGTCGGCTCGCCGTGGCGCTCTTATCGTTGTCG
CGGCAGAGTTAAGGCGCTGT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTIMATPHEPKQDRSRATRQRLLEATIDCLAEMGWAAATVAVVAERAGVSRGAAQHHFPTREDLITAALEYMFDTRNEQA
RREAEAMSEQLDGIARTEAVVEGLVESYTSPLFKAALQVWTHAAADPVLRERIVPLEAKFGRASHRRAVEALGVDDSDPV
AHHLVQATLDLARGLGLADVLTDDSARRKQIIHQWAVTLHSALHTGVVSVAAEPA

Sequences:

>Translated_215_residues
MTIMATPHEPKQDRSRATRQRLLEATIDCLAEMGWAAATVAVVAERAGVSRGAAQHHFPTREDLITAALEYMFDTRNEQA
RREAEAMSEQLDGIARTEAVVEGLVESYTSPLFKAALQVWTHAAADPVLRERIVPLEAKFGRASHRRAVEALGVDDSDPV
AHHLVQATLDLARGLGLADVLTDDSARRKQIIHQWAVTLHSALHTGVVSVAAEPA
>Mature_214_residues
TIMATPHEPKQDRSRATRQRLLEATIDCLAEMGWAAATVAVVAERAGVSRGAAQHHFPTREDLITAALEYMFDTRNEQAR
REAEAMSEQLDGIARTEAVVEGLVESYTSPLFKAALQVWTHAAADPVLRERIVPLEAKFGRASHRRAVEALGVDDSDPVA
HHLVQATLDLARGLGLADVLTDDSARRKQIIHQWAVTLHSALHTGVVSVAAEPA

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23436; Mature: 23305

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIMATPHEPKQDRSRATRQRLLEATIDCLAEMGWAAATVAVVAERAGVSRGAAQHHFPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCC
REDLITAALEYMFDTRNEQARREAEAMSEQLDGIARTEAVVEGLVESYTSPLFKAALQVW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
THAAADPVLRERIVPLEAKFGRASHRRAVEALGVDDSDPVAHHLVQATLDLARGLGLADV
HHHHCCHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
LTDDSARRKQIIHQWAVTLHSALHTGVVSVAAEPA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TIMATPHEPKQDRSRATRQRLLEATIDCLAEMGWAAATVAVVAERAGVSRGAAQHHFPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCC
REDLITAALEYMFDTRNEQARREAEAMSEQLDGIARTEAVVEGLVESYTSPLFKAALQVW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
THAAADPVLRERIVPLEAKFGRASHRRAVEALGVDDSDPVAHHLVQATLDLARGLGLADV
HHHHCCHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
LTDDSARRKQIIHQWAVTLHSALHTGVVSVAAEPA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA