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The map label for this gene is 54027299

Identifier: 54027299

GI number: 54027299

Start: 5627958

End: 5628275

Strand: Reverse

Name: 54027299

Synonym: nfa53250

Alternate gene names: NA

Gene position: 5628275-5627958 (Counterclockwise)

Preceding gene: 54027300

Following gene: 54027298

Centisome position: 93.47

GC content: 69.5

Gene sequence:

>318_bases
ATGTCGAGACCTCAGCCACGTCGCCGAGCGCGGGCCCGGCGAGGACCGCTGCTGGAGTTCGGCAGCTTCCTCGTCGATCG
CCGCATCGCGCTCGGACTGACCCAGCTCGACGTCGCCGAGCTCGCCGACGTCGGATTGTCCTCGGTCCGGGCACTCGAAG
GCGGACACGATTCCCCGACGCTGGCCGTGACGCTACGCGTCCTCGACGCGCTCGGTCTGACACTGGTCAGCCTCACCGGA
ACCGCAGCTGATGCCATCACCGGCAGGGCCGCCAGGGTCCGCCCGGCACAGGAGGTCGACGATGAGCAACTGGCCTGA

Upstream 100 bases:

>100_bases
GAAACCGGTTTATCGTTGTATTGGCAACGATAAAGCTCGGGTTGCTGGCGGCGGGATCTGCCCCGCTGCTTATCGTCAGC
ATGACGCTGATAGGAGTGGG

Downstream 100 bases:

>100_bases
GCCCGGACGCCTCCGCGACGTCGAGTCTGCCGATGTGTACAAGTGCGGTCGCCTGGCGGGAACCCTTCGCAGGGACGGTG
ACGACGTGGTCTTCACCTAC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSRPQPRRRARARRGPLLEFGSFLVDRRIALGLTQLDVAELADVGLSSVRALEGGHDSPTLAVTLRVLDALGLTLVSLTG
TAADAITGRAARVRPAQEVDDEQLA

Sequences:

>Translated_105_residues
MSRPQPRRRARARRGPLLEFGSFLVDRRIALGLTQLDVAELADVGLSSVRALEGGHDSPTLAVTLRVLDALGLTLVSLTG
TAADAITGRAARVRPAQEVDDEQLA
>Mature_104_residues
SRPQPRRRARARRGPLLEFGSFLVDRRIALGLTQLDVAELADVGLSSVRALEGGHDSPTLAVTLRVLDALGLTLVSLTGT
AADAITGRAARVRPAQEVDDEQLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11184; Mature: 11053

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPQPRRRARARRGPLLEFGSFLVDRRIALGLTQLDVAELADVGLSSVRALEGGHDSPT
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
LAVTLRVLDALGLTLVSLTGTAADAITGRAARVRPAQEVDDEQLA
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SRPQPRRRARARRGPLLEFGSFLVDRRIALGLTQLDVAELADVGLSSVRALEGGHDSPT
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
LAVTLRVLDALGLTLVSLTGTAADAITGRAARVRPAQEVDDEQLA
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA