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The map label for this gene is 54027274

Identifier: 54027274

GI number: 54027274

Start: 5601711

End: 5602025

Strand: Reverse

Name: 54027274

Synonym: nfa53000

Alternate gene names: NA

Gene position: 5602025-5601711 (Counterclockwise)

Preceding gene: 54027288

Following gene: 54027273

Centisome position: 93.04

GC content: 66.67

Gene sequence:

>315_bases
ATGGACGGCGCAGCGGCTCGGAATCCTTCCGCGATCCAGAACAGCCCTTCCGAAGAAGACGACAGCGGCCTGTCCCGCCG
CGAACTCGACATCCTGGCCTTCGAACGGCAGTGGTGGAAATACGCCGGTGCCAAGGAGGAGGCCATCCGCGAGCTGTTCG
GGATGTCGCCGACGCGCTACTACCAGGTGCTCAACGCGGTCGTGGACCGTCCCGAGGCGCTGGCCGCCGACCCGATGCTG
GTGAAGCGGCTGCGCAGGTTGCGCGCGAGCAGGCAGAAGGCAAGGGCCGCGCGGCGTCTCGGTTTTCAGGTATGA

Upstream 100 bases:

>100_bases
CGCCGGGGCGAAGGCCGAACCATCCCCGGCCGCCGTGGTTCAATGATGCGCGACGTACAAGCACCATTTTCGTCTGGTGG
TCACTCGGCGAGGGAGCGAG

Downstream 100 bases:

>100_bases
CCGGCGTGACGCGGGCGCACCGGCGCCGTGAAGGACTAGGGTCGGCACCGTGAACTACCCCAATCCCACCTCCGGCGGGC
CGCCGTTGCGCGCGCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDGAAARNPSAIQNSPSEEDDSGLSRRELDILAFERQWWKYAGAKEEAIRELFGMSPTRYYQVLNAVVDRPEALAADPML
VKRLRRLRASRQKARAARRLGFQV

Sequences:

>Translated_104_residues
MDGAAARNPSAIQNSPSEEDDSGLSRRELDILAFERQWWKYAGAKEEAIRELFGMSPTRYYQVLNAVVDRPEALAADPML
VKRLRRLRASRQKARAARRLGFQV
>Mature_104_residues
MDGAAARNPSAIQNSPSEEDDSGLSRRELDILAFERQWWKYAGAKEEAIRELFGMSPTRYYQVLNAVVDRPEALAADPML
VKRLRRLRASRQKARAARRLGFQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11863; Mature: 11863

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGAAARNPSAIQNSPSEEDDSGLSRRELDILAFERQWWKYAGAKEEAIRELFGMSPTRY
CCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
YQVLNAVVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFQV
HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDGAAARNPSAIQNSPSEEDDSGLSRRELDILAFERQWWKYAGAKEEAIRELFGMSPTRY
CCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
YQVLNAVVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFQV
HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA