| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is pit [H]
Identifier: 54027225
GI number: 54027225
Start: 5548103
End: 5549272
Strand: Reverse
Name: pit [H]
Synonym: nfa52510
Alternate gene names: 54027225
Gene position: 5549272-5548103 (Counterclockwise)
Preceding gene: 54027226
Following gene: 54027224
Centisome position: 92.16
GC content: 71.11
Gene sequence:
>1170_bases GTGACCGCCGAATTACTGGTGCTGCTGATCGTCATCGCGACGGCACTCACATTCGATTTCACCAACGGCTTCCACGACAC CGCCAACGCAATGGCCACCTCCATCGCCACCGGGGCGCTGCGGCCACGCATCGCGGTGGCCCTCTCGGCGGCGCTGAACC TCATCGGCGCCTTCCTCTCGGTCGCGGTGGCCGCGACCGTCGCCAAGGGCATCGTCCAGCTCGACGCGGTGGGCGGGCAG GACCTGCTGGTGATCGTCTTCGCCGGGTTGGTCGGCGCGATTCTCTGGAACGTCTTCACCTGGTTGCTCGGCCTGCCGTC GAGCTCGTCGCACGCGCTGTTCGGCGGTCTCATCGGCGCCACCGTCGCCGCGCTCGGCTGGGGCGGGGTGATCTGGGCGT CGGGCTCCGAGGGCGTGCTGACCAAGATCGTGCTGCCCGCGGTGCTGGCGCCGGTGGTGGCCGCGCTGGTCTCGACCATC GGCACCTGGGGCGTGTACCGGGTCACCGCGTCCTCGGATCAGGCCAAGGTGCGCTCGGGCTTCCGCTGGGGGCAGGTGGG CTCGGCGTCGCTGGTCTCGCTGGCGCACGGCACCAACGACGCGCAGAAGACGATGGGCGTGATCTTCCTTGCGCTGGTCG CGCACGGCACGCTCACCAAGGACGACGAGATGCCGCTGTGGGTGATGGCCGCCTGCGCGTTCGCCATCGCCGCGGGCACC TACCTGGGCGGCTGGCGGATCATCCGCACCCTGGGCAAGGGCCTGGTGGAGATCGACTCGCCGCAGGGCCTGGCCGCGGA GTCCTCCTCGGCCGCGATCATCCTGACCTCCGCGCATTTCGGGCTGCCGCTCTCGACGACGCAGACCGCCACCGGCTCGA TCCTGGGCAGCGGCATCGGCAAGGGCGCCGAGGTGCGCTGGGCGGTGATGGGCCGCATGGCGGTGGCCTGGCTGCTGACG CTGCCGATGGCCGGCCTGGCGGGCGCGATCTGCTGGGCCGTCGCCCACCTGATCGGCGGGTTCGCGGGCGTGCTCGTGGT GTTCGCCGTGCTGGTGGTGCTGTGCACGCTGATGTGGGTGCGCTCGCGGCGCGACAAGGTCGACACCACCAACGTCAACG AGTGGCCGGGCACCGGCGCGCACCCGACCCCCCGATCCCCCTCGCTGTAG
Upstream 100 bases:
>100_bases CCCTGATCCGGTGAGGCGCGCACTTTAGCGCATCGGGGTGAACGCCCGACACGCGGCGACCGCCTGGCAGGCGAACAGAC GGTTACCGCACACTGGAGAC
Downstream 100 bases:
>100_bases AAGGAGTCCGCAGTGCACACCCTCGCCACGAACCTGTCCGCGCTGTGGCAGGTCGTCGTCGCCGCGCTGGTGCTCGGCGC GGGCCTGCCGATCGTCTTCG
Product: putative phosphate transporter
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTAELLVLLIVIATALTFDFTNGFHDTANAMATSIATGALRPRIAVALSAALNLIGAFLSVAVAATVAKGIVQLDAVGGQ DLLVIVFAGLVGAILWNVFTWLLGLPSSSSHALFGGLIGATVAALGWGGVIWASGSEGVLTKIVLPAVLAPVVAALVSTI GTWGVYRVTASSDQAKVRSGFRWGQVGSASLVSLAHGTNDAQKTMGVIFLALVAHGTLTKDDEMPLWVMAACAFAIAAGT YLGGWRIIRTLGKGLVEIDSPQGLAAESSSAAIILTSAHFGLPLSTTQTATGSILGSGIGKGAEVRWAVMGRMAVAWLLT LPMAGLAGAICWAVAHLIGGFAGVLVVFAVLVVLCTLMWVRSRRDKVDTTNVNEWPGTGAHPTPRSPSL
Sequences:
>Translated_389_residues MTAELLVLLIVIATALTFDFTNGFHDTANAMATSIATGALRPRIAVALSAALNLIGAFLSVAVAATVAKGIVQLDAVGGQ DLLVIVFAGLVGAILWNVFTWLLGLPSSSSHALFGGLIGATVAALGWGGVIWASGSEGVLTKIVLPAVLAPVVAALVSTI GTWGVYRVTASSDQAKVRSGFRWGQVGSASLVSLAHGTNDAQKTMGVIFLALVAHGTLTKDDEMPLWVMAACAFAIAAGT YLGGWRIIRTLGKGLVEIDSPQGLAAESSSAAIILTSAHFGLPLSTTQTATGSILGSGIGKGAEVRWAVMGRMAVAWLLT LPMAGLAGAICWAVAHLIGGFAGVLVVFAVLVVLCTLMWVRSRRDKVDTTNVNEWPGTGAHPTPRSPSL >Mature_388_residues TAELLVLLIVIATALTFDFTNGFHDTANAMATSIATGALRPRIAVALSAALNLIGAFLSVAVAATVAKGIVQLDAVGGQD LLVIVFAGLVGAILWNVFTWLLGLPSSSSHALFGGLIGATVAALGWGGVIWASGSEGVLTKIVLPAVLAPVVAALVSTIG TWGVYRVTASSDQAKVRSGFRWGQVGSASLVSLAHGTNDAQKTMGVIFLALVAHGTLTKDDEMPLWVMAACAFAIAAGTY LGGWRIIRTLGKGLVEIDSPQGLAAESSSAAIILTSAHFGLPLSTTQTATGSILGSGIGKGAEVRWAVMGRMAVAWLLTL PMAGLAGAICWAVAHLIGGFAGVLVVFAVLVVLCTLMWVRSRRDKVDTTNVNEWPGTGAHPTPRSPSL
Specific function: Low-affinity inorganic phosphate transport [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803173, Length=152, Percent_Identity=33.5526315789474, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI31543630, Length=171, Percent_Identity=29.2397660818713, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1789907, Length=224, Percent_Identity=33.0357142857143, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789360, Length=217, Percent_Identity=33.1797235023041, Blast_Score=93, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71981576, Length=170, Percent_Identity=30, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17539280, Length=176, Percent_Identity=30.6818181818182, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32566716, Length=184, Percent_Identity=29.3478260869565, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25146401, Length=161, Percent_Identity=27.3291925465839, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536725, Length=178, Percent_Identity=27.5280898876405, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319773, Length=171, Percent_Identity=29.8245614035088, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356511, Length=212, Percent_Identity=25.4716981132075, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 39844; Mature: 39713
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAELLVLLIVIATALTFDFTNGFHDTANAMATSIATGALRPRIAVALSAALNLIGAFLS CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VAVAATVAKGIVQLDAVGGQDLLVIVFAGLVGAILWNVFTWLLGLPSSSSHALFGGLIGA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TVAALGWGGVIWASGSEGVLTKIVLPAVLAPVVAALVSTIGTWGVYRVTASSDQAKVRSG HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCC FRWGQVGSASLVSLAHGTNDAQKTMGVIFLALVAHGTLTKDDEMPLWVMAACAFAIAAGT CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH YLGGWRIIRTLGKGLVEIDSPQGLAAESSSAAIILTSAHFGLPLSTTQTATGSILGSGIG HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCC KGAEVRWAVMGRMAVAWLLTLPMAGLAGAICWAVAHLIGGFAGVLVVFAVLVVLCTLMWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRRDKVDTTNVNEWPGTGAHPTPRSPSL HHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAELLVLLIVIATALTFDFTNGFHDTANAMATSIATGALRPRIAVALSAALNLIGAFLS CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VAVAATVAKGIVQLDAVGGQDLLVIVFAGLVGAILWNVFTWLLGLPSSSSHALFGGLIGA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TVAALGWGGVIWASGSEGVLTKIVLPAVLAPVVAALVSTIGTWGVYRVTASSDQAKVRSG HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCC FRWGQVGSASLVSLAHGTNDAQKTMGVIFLALVAHGTLTKDDEMPLWVMAACAFAIAAGT CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH YLGGWRIIRTLGKGLVEIDSPQGLAAESSSAAIILTSAHFGLPLSTTQTATGSILGSGIG HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCC KGAEVRWAVMGRMAVAWLLTLPMAGLAGAICWAVAHLIGGFAGVLVVFAVLVVLCTLMWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRRDKVDTTNVNEWPGTGAHPTPRSPSL HHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]