Click here to switch to the map view.

The map label for this gene is 54027224

Identifier: 54027224

GI number: 54027224

Start: 5547809

End: 5548090

Strand: Reverse

Name: 54027224

Synonym: nfa52500

Alternate gene names: NA

Gene position: 5548090-5547809 (Counterclockwise)

Preceding gene: 54027225

Following gene: 54027223

Centisome position: 92.14

GC content: 71.28

Gene sequence:

>282_bases
GTGCACACCCTCGCCACGAACCTGTCCGCGCTGTGGCAGGTCGTCGTCGCCGCGCTGGTGCTCGGCGCGGGCCTGCCGAT
CGTCTTCGCGCTCGGCGTGCGTTGGTGGTCGGCGGCGGCTACCGTCGATGCCGAGGGCGGGATCACCCGGCGCAACCACG
TCGCCGCCGCGGGCGCGTACCTCTGCTTCGCGCTGATCGTCGCGGCGATCGTCACCGGAATCCTCTACACCGCCAAGGCC
TTCCTGGCCGCGCGGTTCGGCATCCACCTGTTCGGAGAGTGA

Upstream 100 bases:

>100_bases
CTCGCGGCGCGACAAGGTCGACACCACCAACGTCAACGAGTGGCCGGGCACCGGCGCGCACCCGACCCCCCGATCCCCCT
CGCTGTAGAAGGAGTCCGCA

Downstream 100 bases:

>100_bases
GGGGCGCACCGTGACCGAGTCGGCATCCGACACCACCAGGCCGAAGGTTCTCGGCCGTATTCTCGGCTGGCTGCGGGCGG
GCTATCCGCAGGGCGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MHTLATNLSALWQVVVAALVLGAGLPIVFALGVRWWSAAATVDAEGGITRRNHVAAAGAYLCFALIVAAIVTGILYTAKA
FLAARFGIHLFGE

Sequences:

>Translated_93_residues
MHTLATNLSALWQVVVAALVLGAGLPIVFALGVRWWSAAATVDAEGGITRRNHVAAAGAYLCFALIVAAIVTGILYTAKA
FLAARFGIHLFGE
>Mature_93_residues
MHTLATNLSALWQVVVAALVLGAGLPIVFALGVRWWSAAATVDAEGGITRRNHVAAAGAYLCFALIVAAIVTGILYTAKA
FLAARFGIHLFGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9680; Mature: 9680

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLATNLSALWQVVVAALVLGAGLPIVFALGVRWWSAAATVDAEGGITRRNHVAAAGAY
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LCFALIVAAIVTGILYTAKAFLAARFGIHLFGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHTLATNLSALWQVVVAALVLGAGLPIVFALGVRWWSAAATVDAEGGITRRNHVAAAGAY
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LCFALIVAAIVTGILYTAKAFLAARFGIHLFGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA