| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54027148
Identifier: 54027148
GI number: 54027148
Start: 5472520
End: 5473545
Strand: Reverse
Name: 54027148
Synonym: nfa51740
Alternate gene names: NA
Gene position: 5473545-5472520 (Counterclockwise)
Preceding gene: 54027149
Following gene: 54027146
Centisome position: 90.9
GC content: 70.86
Gene sequence:
>1026_bases ATGAACGACGTTGCCAAAGTTATCCACCTGCACGACGTGACCACCGAGACCCGGCCGCGTCCGGCCGCCCGGCGCTGGCC GGAGCCGCCGCCCGGCGCACCCGCGGGCGGCGTCACCTCCCTGCTCGAGCGTCGCGCCGCGAGCGAACCGCCGGTGCCGC AGTCGCTGGGCGACCTCGTGCGCGGCAAGCTCGGCAAGCAGATCAGCGCCACCGCCGAGTTCGCCCGCCGCAGGCTCGCC GGCGACTACCGGGTCGACGAATTCGGCTTCGACGCCGACCTGCTGGAGAACGTCCTGCTGCCGGCGCTGCGTCCGCTGGC CGAGCACTGGTTCCGGGTCGAGGTCCGCGGCATCGAGAACATCCCGGCCACCGGCGGCGCGCTCATCGTGGCCAATCACG CGGGCACCGTGCCGGTGGACGGGCTGATGCTCCAGCTGGCCGTGCACGACCGGCATGTCGCGCACCGCGCGTTGCGGCTG CTGGCCGCCGATCTGATCTTCGAACTCCCGGTGCTCGGCGTGCTCGCCCGCAAGGCTGGCCACACCCTGGCCTGCCGCGA GGACGCCGAACGGCTGCTGCGTTCCGGTGAGCTCACCGGAGTGTTTCCCGAGGGCTTCAAGGGCGTGGGCAAGAGCTACG CCGACCGCTACAAGCTGCAGCGCTTCGGCCGGGGCGGCTTCGTCGCCGCCGCCGTGCGCACCGGCGTGCCGATCATCCCG TGCTCGATCGTCGGCTCGGAGGAGATCTATCCCAAGCTGGCCGACATCAAGCCGCTGGCTCGGCTGCTCGGCCTGCCCTA CTTCCCGGTGACGCCGACCTTCCCGCATCTCGGCCTGCTCGGCGCGGTCCCGCTGCCGTCGAAGTGGTACATCGAATTCG GCGAGCCGATCCCCACCACGGCCTACGAGCCGGAGGCCGCCGACGATCCGATGACCATGTTCGAGGTCACCGATCAGGTC CGCGAGACCATCCAGCAGACGCTCTACAGCCTGCTGACCAAGCGCCGCAACCCGTTCACCGGGTAG
Upstream 100 bases:
>100_bases TCGGGGGCGCAGCGCTGCGACCCGTCATCGATCCGCGCTGGATCGATGCCGCAGAACACAGACTGCTCGGCCTGCTCGGG GCCGGTACGGGAGCACACAC
Downstream 100 bases:
>100_bases GGCGCGCTACAGGTTCTCCCGGCGGCGGGTCACCGCCGCCGCCACCGCGCCGCCCGCGGCACCCAGTGCGAGCGCGGTCG GTACGCCGATCTTGGCGGCC
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLVRGKLGKQISATAEFARRRLA GDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIENIPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRL LAADLIFELPVLGVLARKAGHTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTTAYEPEAADDPMTMFEVTDQV RETIQQTLYSLLTKRRNPFTG
Sequences:
>Translated_341_residues MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLVRGKLGKQISATAEFARRRLA GDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIENIPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRL LAADLIFELPVLGVLARKAGHTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTTAYEPEAADDPMTMFEVTDQV RETIQQTLYSLLTKRRNPFTG >Mature_341_residues MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLVRGKLGKQISATAEFARRRLA GDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIENIPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRL LAADLIFELPVLGVLARKAGHTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTTAYEPEAADDPMTMFEVTDQV RETIQQTLYSLLTKRRNPFTG
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML2427 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR016676 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 37271; Mature: 37271
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLV CCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH RGKLGKQISATAEFARRRLAGDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIEN HHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCC IPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRLLAADLIFELPVLGVLARKAG CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP CEEEHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTT EEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCC AYEPEAADDPMTMFEVTDQVRETIQQTLYSLLTKRRNPFTG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLV CCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH RGKLGKQISATAEFARRRLAGDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIEN HHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCC IPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRLLAADLIFELPVLGVLARKAG CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP CEEEHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTT EEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCC AYEPEAADDPMTMFEVTDQVRETIQQTLYSLLTKRRNPFTG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]