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The map label for this gene is 54027126

Identifier: 54027126

GI number: 54027126

Start: 5453963

End: 5454385

Strand: Reverse

Name: 54027126

Synonym: nfa51520

Alternate gene names: NA

Gene position: 5454385-5453963 (Counterclockwise)

Preceding gene: 54027129

Following gene: 54027125

Centisome position: 90.59

GC content: 68.32

Gene sequence:

>423_bases
ATGGACAAATCGGATGTCCGTTCGAGGTGGCCGGACCCGGGCAACTCGGACGCGGCTAACCCGTGGCCTACCCTGGTTCA
GGTGAGCGAATCCACTGGATCGGAGAGTGCGCGGCCCGCCGGGAGTCCGCGCGTCGGACGCAGCCTGGCGATCAATCTGG
CGCTGTACACCCTGGCCAGGCTGGTGCTGGTGGCCGTGATCACGGTGGTGATCGTGCTGGTGGCCCAGCTCGTGGATGTC
CAGGTGCCGTTGGTGGTGGCGATTCTGTTCGCGCTGATCATCGCGATGCCGCTGTCGCTGACCCTGTTCAAGGGCCTGCG
GGCGCGGGTGAACGCCGACATCGCGGCCGTCGACGCCAAGCGCAGGCAGGACAAGGCCCAGCTGCGGGCGCGGCTGCGCG
GCGAAGGCGACGACGCGTCGTGA

Upstream 100 bases:

>100_bases
CAAACCTCTCCGTTCTCGACAGTTCCCTCATCAGATGGCGCCATCGTCGCACCCGAACCCCTAGGTACTCGAACCACCTA
CAGTTGGTAAAGGCGAAGTA

Downstream 100 bases:

>100_bases
CCGGGGCGCGGCGGTGAAGTTCTGCGACCGCAGCGTCGCGCGCGACTGGGTGGACAACGCGGTGCGCCTGATCGACGCCG
ACGCCCAGCGCAGCGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDKSDVRSRWPDPGNSDAANPWPTLVQVSESTGSESARPAGSPRVGRSLAINLALYTLARLVLVAVITVVIVLVAQLVDV
QVPLVVAILFALIIAMPLSLTLFKGLRARVNADIAAVDAKRRQDKAQLRARLRGEGDDAS

Sequences:

>Translated_140_residues
MDKSDVRSRWPDPGNSDAANPWPTLVQVSESTGSESARPAGSPRVGRSLAINLALYTLARLVLVAVITVVIVLVAQLVDV
QVPLVVAILFALIIAMPLSLTLFKGLRARVNADIAAVDAKRRQDKAQLRARLRGEGDDAS
>Mature_140_residues
MDKSDVRSRWPDPGNSDAANPWPTLVQVSESTGSESARPAGSPRVGRSLAINLALYTLARLVLVAVITVVIVLVAQLVDV
QVPLVVAILFALIIAMPLSLTLFKGLRARVNADIAAVDAKRRQDKAQLRARLRGEGDDAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14964; Mature: 14964

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSDVRSRWPDPGNSDAANPWPTLVQVSESTGSESARPAGSPRVGRSLAINLALYTLAR
CCCCCHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LVLVAVITVVIVLVAQLVDVQVPLVVAILFALIIAMPLSLTLFKGLRARVNADIAAVDAK
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRQDKAQLRARLRGEGDDAS
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDKSDVRSRWPDPGNSDAANPWPTLVQVSESTGSESARPAGSPRVGRSLAINLALYTLAR
CCCCCHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LVLVAVITVVIVLVAQLVDVQVPLVVAILFALIIAMPLSLTLFKGLRARVNADIAAVDAK
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRQDKAQLRARLRGEGDDAS
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA