| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54027108
Identifier: 54027108
GI number: 54027108
Start: 5437011
End: 5437373
Strand: Reverse
Name: 54027108
Synonym: nfa51340
Alternate gene names: NA
Gene position: 5437373-5437011 (Counterclockwise)
Preceding gene: 54027110
Following gene: 54027107
Centisome position: 90.3
GC content: 69.15
Gene sequence:
>363_bases ATGACGGCATCGATCGTCTTCCTCGTCTACGTCAACGACACCGCCGCGTCCGCCCGCTTCTACGGCGACCTGCTGGACAT GAAGCCCGATTTCGAGACGCCCGGCTACATCACCTTCGACCTCGGCCCCGGCGCCGATCTGGCGCTGTGGTCGGGCCGGT TCGACGGTCTCTCGCCCGCCACGCCGCGCACCTCCGAGGTGTGCCTGGCGCTGCCCGACGGCGCCGAGGTGGACGCGAAG TTCCGGGAGTGGCAGGCCAAGGGCGTCACCGTGGTGCAGGAGCCGCACGACGAATCGTTCGGGCGCACCTTCGTCGTCGC CGATCCGGACGGCAACCTCATCCGCGTCGCACCGCAGGACTGA
Upstream 100 bases:
>100_bases GGCGGCACTGTTGCAGTGTGTCGGGAAATCACGCCGGAATGTGTCGGGTATCTGCCCGACAGTGGCGGGGCAACAGCAAC CGATCCTGGAAAGGACTGCC
Downstream 100 bases:
>100_bases CCGCGCCGGAGACCGCGGCGGCCGGCCCTCGGCGGGCCGACTGCCGCGGTCTGTGTGACCAGGGTGACCGCGCTCGGGGC GGGTCGATCTGACAGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Protein; Glyoxalase Family Protein Superfamily; Glyoxalase Family Protein; Phenazine Antibiotic Biosynthesis Protein; Glyoxalase/Dioxygenase; Glyoxalase; Drug Resistance Protein; Ehpr Protein; Fosfomycin Resistance Protein FosX
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPATPRTSEVCLALPDGAEVDAK FREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD
Sequences:
>Translated_120_residues MTASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPATPRTSEVCLALPDGAEVDAK FREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD >Mature_119_residues TASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPATPRTSEVCLALPDGAEVDAKF REWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13027; Mature: 12895
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPA CCCEEEEEEEECCCCCCCEEEEHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCC TPRTSEVCLALPDGAEVDAKFREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD CCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCC >Mature Secondary Structure TASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPA CCEEEEEEEECCCCCCCEEEEHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCC TPRTSEVCLALPDGAEVDAKFREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD CCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA