Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54027068

Identifier: 54027068

GI number: 54027068

Start: 5391748

End: 5392227

Strand: Reverse

Name: 54027068

Synonym: nfa50940

Alternate gene names: NA

Gene position: 5392227-5391748 (Counterclockwise)

Preceding gene: 54027069

Following gene: 54027063

Centisome position: 89.55

GC content: 67.29

Gene sequence:

>480_bases
ATGAGCACGACAACCAACGAAGCCACCGTCACCAAGAGCGGCGATCGGGAGATCCACGTGGAGCGGATCTTCAACGCCCC
GGTCGAGCGGGTCTGGGAGGCGTACAGCCGCATCGAGCAGCTGGTCCAGTGGTGGGGCCGGGGCAACACTCTCGACGTCG
AACGATGGGAGTTCCGCAAGGGCGGGCACTACCGCTTCGTCGAGCACGCCGACGGCGAGGCGCACGGCTTCGAAGGCCGG
TTCCGCGAGATCACCCCGCGCGAGCGCATCGTGCAGTCCTTCGAATGGGACGGCATGCCCGCGCACGTCGCGATCGACAG
CACCACCTTCGTCGACCTCGGTGACGGGCGCACCAAAGTGGTCACCGACAGCCAGTTCCACACCCCGTTCGAACGCGACG
GCATGTTCGAGTCGGGGATGTCGGAGGGGCTGGAGGCCAGCTACCGCGCGCTGGACGCCCTGCTGGCCCGATCGGCTTGA

Upstream 100 bases:

>100_bases
TCTTCGACCGTGAGCTGGCGTGGCTGCAGGGCTACCGGCGGATGGTGGAAGCGCGGATGGACCGTCTCGGTGAATTCCTC
GAACGAACGGAGCGGGACAG

Downstream 100 bases:

>100_bases
GTCACCGATCAACCCGAGCCACAGCGGTTTCCGGCGCCGTCGCGGTCACTCGCGGGCCGCGCCCAGCCTGCGCTTGCGCG
GTTTCAGATGCAGCGGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Hsp90 ATPase Activator Family Protein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSTTTNEATVTKSGDREIHVERIFNAPVERVWEAYSRIEQLVQWWGRGNTLDVERWEFRKGGHYRFVEHADGEAHGFEGR
FREITPRERIVQSFEWDGMPAHVAIDSTTFVDLGDGRTKVVTDSQFHTPFERDGMFESGMSEGLEASYRALDALLARSA

Sequences:

>Translated_159_residues
MSTTTNEATVTKSGDREIHVERIFNAPVERVWEAYSRIEQLVQWWGRGNTLDVERWEFRKGGHYRFVEHADGEAHGFEGR
FREITPRERIVQSFEWDGMPAHVAIDSTTFVDLGDGRTKVVTDSQFHTPFERDGMFESGMSEGLEASYRALDALLARSA
>Mature_158_residues
STTTNEATVTKSGDREIHVERIFNAPVERVWEAYSRIEQLVQWWGRGNTLDVERWEFRKGGHYRFVEHADGEAHGFEGRF
REITPRERIVQSFEWDGMPAHVAIDSTTFVDLGDGRTKVVTDSQFHTPFERDGMFESGMSEGLEASYRALDALLARSA

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18256; Mature: 18125

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTNEATVTKSGDREIHVERIFNAPVERVWEAYSRIEQLVQWWGRGNTLDVERWEFRK
CCCCCCCEEEECCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
GGHYRFVEHADGEAHGFEGRFREITPRERIVQSFEWDGMPAHVAIDSTTFVDLGDGRTKV
CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCEEE
VTDSQFHTPFERDGMFESGMSEGLEASYRALDALLARSA
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTTNEATVTKSGDREIHVERIFNAPVERVWEAYSRIEQLVQWWGRGNTLDVERWEFRK
CCCCCCEEEECCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
GGHYRFVEHADGEAHGFEGRFREITPRERIVQSFEWDGMPAHVAIDSTTFVDLGDGRTKV
CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCEEE
VTDSQFHTPFERDGMFESGMSEGLEASYRALDALLARSA
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA