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The map label for this gene is fprB [H]

Identifier: 54027063

GI number: 54027063

Start: 5387061

End: 5388731

Strand: Reverse

Name: fprB [H]

Synonym: nfa50890

Alternate gene names: 54027063

Gene position: 5388731-5387061 (Counterclockwise)

Preceding gene: 54027068

Following gene: 54027058

Centisome position: 89.5

GC content: 70.74

Gene sequence:

>1671_bases
ATGGCCTACGTAATCACGCAGCGTTGTTGCAACGACGCGAGCTGCGTCTCCGAGTGCCCGGTCGACTGCATTCGCCCCAC
CCCGGACCAGCCGGAGTTCGCGACGACCGAAATGCTCTACATCGACCCGGACACCTGCATCGACTGCGGTGCCTGCGTGG
ACGCGTGCCCGGTGGAGGCCATCTTCTCCGAGGACGACCTGACGGCCTCGCTCGCGCGGTTCCGCGACGTCAACGCCGCC
TACTTCCAGCGTCATCCGCTCGAACCGAACTTCGATCCGATCGTGGCGCCGGTGCGCCCGCCCAAGGAACTCGGCACGCT
GCGGGTCGCGATCGTCGGCGCCGGGCCGGCCGCCTGCTACGCCGCCGAGGAACTGCTGCGGCGCTGCGATGTCGAGGTCG
AGATGTTCGACCGGCTGCCCACCCCGTGGGGCCTGGTGCGCGCGGGCGTCGCCCCGGACCACCCCGGCACCAAGACCGTC
TCGCGCATGTTCGAGTCGGCCTTCCGCCGCGACACCCTGCAGTACTACCTCAACGTCGAGGTGGGCACGCACATCTCGCA
CGAGGAACTGCTCGCCCACCACCACGCGGTGATCTACGCCGTCGGCGCCGCCTCGGACCGCCGGATGAACATCCCCGGCG
AGGACCTGCCCGGCAGCCACTCCGCGACCGAGTTCGTGGCCTGGTACAACGGCCATCCCGATTTCGCCGACCGCACCTTC
GATCTGTCGGGCGAGCGCGCCGTGATCGTCGGCAACGGCAACGTCGCCCTCGACGTGGCCCGCGTGCTCACCGTCGACCC
CGACGAACTCGCCAAGACCGACATCGCCGACCACGCGCTGGCGGCGTTGCGGGCGAGCAACATCCGCGAGGTCGTGGTGC
TCGGCCGCCGCGGACCGCTGCAGGCCGCCTACACCACGCCGGAGTTCATGGCGCTCGCGCACCTGAAGGGCGTCGACGTG
GTCGTCGAGGACGCCGAGCTGGTGCTCGACCCGGTCAGCCAGGCGCTGCTCGACGACCCCGACGCCGAGCCGTCGCTGCG
GCTGAAGTACACCCTCGCCCAGGAGTACGCCGCCACCACTCCCGACCCGGCCAACAAGCGCATCGTCTTCCGCTACCTGG
CCTCGCCGACCGCGCTCACCGGCAGCGACCGGGTCGAGGGCATCGAATTCGTGCGCAACGAGCTGGTCGAGGAGGGCGGA
CAGCTGGTCGCCCGGGCCACCGGCGAGACCGACCGGCTCGACGCGTCGCTGGTGCTGCGCTCGATCGGCTACAAGGGCGA
GCCGGTGGGCGAACTGCCCTTCGACGAGCAGCGCGGCGTGGTGCCCAACGCGGCGGGCCGCGTGCTCGGCGCCGACGGCG
AACCGTTGACCGGCGTGTATGTCAGCGGCTGGATCAAGCGCGGTCCGCGCGGTGTCATCGGCTCCAACCGCACCGACTCG
CAGGAGACCGTCGAACAGCTCATCGCCGACTTCATGGCGGGCAAACTCGCCGCACCCGGCGCCGACCGCGCGGCACTGCA
GACGCTGGTCGCCGAACGGCAGGCCGACCTGGTCGACCGGCAGGGCTGGAAGAGCATCGATGAGGCGGAGAAGACCGCGG
GCAAGTCCGCGGGACGGCCGCGGGTCAAGTTCACCACGCGCGAGGACCTGCTGAAGGCCGCGCGCGGCTGA

Upstream 100 bases:

>100_bases
ACTGAAAGCGGCGTCACATATCGCTATCCGCCCACTGTGATGCCTGTCCACCGACCCGCGGGTGGCGCCAGCCCACGTAC
GTTTCGAGGATCTGCACACT

Downstream 100 bases:

>100_bases
GCGGATCGACGGGCGGCGGGCGGCCACGAGGGCGTCCGCCGCTCGTGTGGGTGCCGGCCGGTCAGCCGGGTAGCGGCATG
ATGCGCACGACGGTCGTCGT

Product: putative ferredoxin reductase

Products: NA

Alternate protein names: FNR [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MAYVITQRCCNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPVEAIFSEDDLTASLARFRDVNAA
YFQRHPLEPNFDPIVAPVRPPKELGTLRVAIVGAGPAACYAAEELLRRCDVEVEMFDRLPTPWGLVRAGVAPDHPGTKTV
SRMFESAFRRDTLQYYLNVEVGTHISHEELLAHHHAVIYAVGAASDRRMNIPGEDLPGSHSATEFVAWYNGHPDFADRTF
DLSGERAVIVGNGNVALDVARVLTVDPDELAKTDIADHALAALRASNIREVVVLGRRGPLQAAYTTPEFMALAHLKGVDV
VVEDAELVLDPVSQALLDDPDAEPSLRLKYTLAQEYAATTPDPANKRIVFRYLASPTALTGSDRVEGIEFVRNELVEEGG
QLVARATGETDRLDASLVLRSIGYKGEPVGELPFDEQRGVVPNAAGRVLGADGEPLTGVYVSGWIKRGPRGVIGSNRTDS
QETVEQLIADFMAGKLAAPGADRAALQTLVAERQADLVDRQGWKSIDEAEKTAGKSAGRPRVKFTTREDLLKAARG

Sequences:

>Translated_556_residues
MAYVITQRCCNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPVEAIFSEDDLTASLARFRDVNAA
YFQRHPLEPNFDPIVAPVRPPKELGTLRVAIVGAGPAACYAAEELLRRCDVEVEMFDRLPTPWGLVRAGVAPDHPGTKTV
SRMFESAFRRDTLQYYLNVEVGTHISHEELLAHHHAVIYAVGAASDRRMNIPGEDLPGSHSATEFVAWYNGHPDFADRTF
DLSGERAVIVGNGNVALDVARVLTVDPDELAKTDIADHALAALRASNIREVVVLGRRGPLQAAYTTPEFMALAHLKGVDV
VVEDAELVLDPVSQALLDDPDAEPSLRLKYTLAQEYAATTPDPANKRIVFRYLASPTALTGSDRVEGIEFVRNELVEEGG
QLVARATGETDRLDASLVLRSIGYKGEPVGELPFDEQRGVVPNAAGRVLGADGEPLTGVYVSGWIKRGPRGVIGSNRTDS
QETVEQLIADFMAGKLAAPGADRAALQTLVAERQADLVDRQGWKSIDEAEKTAGKSAGRPRVKFTTREDLLKAARG
>Mature_555_residues
AYVITQRCCNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPVEAIFSEDDLTASLARFRDVNAAY
FQRHPLEPNFDPIVAPVRPPKELGTLRVAIVGAGPAACYAAEELLRRCDVEVEMFDRLPTPWGLVRAGVAPDHPGTKTVS
RMFESAFRRDTLQYYLNVEVGTHISHEELLAHHHAVIYAVGAASDRRMNIPGEDLPGSHSATEFVAWYNGHPDFADRTFD
LSGERAVIVGNGNVALDVARVLTVDPDELAKTDIADHALAALRASNIREVVVLGRRGPLQAAYTTPEFMALAHLKGVDVV
VEDAELVLDPVSQALLDDPDAEPSLRLKYTLAQEYAATTPDPANKRIVFRYLASPTALTGSDRVEGIEFVRNELVEEGGQ
LVARATGETDRLDASLVLRSIGYKGEPVGELPFDEQRGVVPNAAGRVLGADGEPLTGVYVSGWIKRGPRGVIGSNRTDSQ
ETVEQLIADFMAGKLAAPGADRAALQTLVAERQADLVDRQGWKSIDEAEKTAGKSAGRPRVKFTTREDLLKAARG

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Homo sapiens, GI111118981, Length=464, Percent_Identity=39.4396551724138, Blast_Score=289, Evalue=4e-78,
Organism=Homo sapiens, GI111118983, Length=470, Percent_Identity=38.936170212766, Blast_Score=283, Evalue=4e-76,
Organism=Escherichia coli, GI87082180, Length=271, Percent_Identity=27.3062730627306, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789606, Length=265, Percent_Identity=26.7924528301887, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788811, Length=319, Percent_Identity=25.3918495297806, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17543860, Length=461, Percent_Identity=31.8872017353579, Blast_Score=223, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6320584, Length=493, Percent_Identity=30.2231237322515, Blast_Score=208, Evalue=2e-54,
Organism=Drosophila melanogaster, GI17137178, Length=457, Percent_Identity=36.980306345733, Blast_Score=255, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013027
- InterPro:   IPR021163
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 60268; Mature: 60137

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVITQRCCNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPVEA
CCEEEEHHHCCCHHHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCHHH
IFSEDDLTASLARFRDVNAAYFQRHPLEPNFDPIVAPVRPPKELGTLRVAIVGAGPAACY
HCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCCCCCHHHCCEEEEEEECCHHHHH
AAEELLRRCDVEVEMFDRLPTPWGLVRAGVAPDHPGTKTVSRMFESAFRRDTLQYYLNVE
HHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE
VGTHISHEELLAHHHAVIYAVGAASDRRMNIPGEDLPGSHSATEFVAWYNGHPDFADRTF
ECCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE
DLSGERAVIVGNGNVALDVARVLTVDPDELAKTDIADHALAALRASNIREVVVLGRRGPL
CCCCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
QAAYTTPEFMALAHLKGVDVVVEDAELVLDPVSQALLDDPDAEPSLRLKYTLAQEYAATT
CEECCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCC
PDPANKRIVFRYLASPTALTGSDRVEGIEFVRNELVEEGGQLVARATGETDRLDASLVLR
CCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
SIGYKGEPVGELPFDEQRGVVPNAAGRVLGADGEPLTGVYVSGWIKRGPRGVIGSNRTDS
HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEHEEEHHHHCCCCCCCCCCCCCH
QETVEQLIADFMAGKLAAPGADRAALQTLVAERQADLVDRQGWKSIDEAEKTAGKSAGRP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
RVKFTTREDLLKAARG
CEEECCHHHHHHHHCC
>Mature Secondary Structure 
AYVITQRCCNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPVEA
CEEEEHHHCCCHHHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCHHH
IFSEDDLTASLARFRDVNAAYFQRHPLEPNFDPIVAPVRPPKELGTLRVAIVGAGPAACY
HCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCCCCCHHHCCEEEEEEECCHHHHH
AAEELLRRCDVEVEMFDRLPTPWGLVRAGVAPDHPGTKTVSRMFESAFRRDTLQYYLNVE
HHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE
VGTHISHEELLAHHHAVIYAVGAASDRRMNIPGEDLPGSHSATEFVAWYNGHPDFADRTF
ECCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE
DLSGERAVIVGNGNVALDVARVLTVDPDELAKTDIADHALAALRASNIREVVVLGRRGPL
CCCCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
QAAYTTPEFMALAHLKGVDVVVEDAELVLDPVSQALLDDPDAEPSLRLKYTLAQEYAATT
CEECCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCC
PDPANKRIVFRYLASPTALTGSDRVEGIEFVRNELVEEGGQLVARATGETDRLDASLVLR
CCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
SIGYKGEPVGELPFDEQRGVVPNAAGRVLGADGEPLTGVYVSGWIKRGPRGVIGSNRTDS
HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEHEEEHHHHCCCCCCCCCCCCCH
QETVEQLIADFMAGKLAAPGADRAALQTLVAERQADLVDRQGWKSIDEAEKTAGKSAGRP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
RVKFTTREDLLKAARG
CEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]