Click here to switch to the map view.

The map label for this gene is 54027069

Identifier: 54027069

GI number: 54027069

Start: 5392224

End: 5392556

Strand: Reverse

Name: 54027069

Synonym: nfa50950

Alternate gene names: NA

Gene position: 5392556-5392224 (Counterclockwise)

Preceding gene: 54027071

Following gene: 54027068

Centisome position: 89.56

GC content: 66.67

Gene sequence:

>333_bases
ATGGTTCAGTATGACTTCCTCGACGCCTCGTTCGGGGCACTCGCGGATCCCACCCGGCGTGGGATCCTCGAGCGCCTCGC
CCGCGGGCCCGCGACCGTCTCCGAGCTGGCCGAGCAGTTCGACATGACCCTCACGGGCATGAAGAAGCACCTGCGACTGC
TGGAGGAGGCGGGCATGATCGACACGGAGAAGCGCGGCCGGGTCAGGTACTGCCGGCTCGGTGCGAACGTCTTCGACCGT
GAGCTGGCGTGGCTGCAGGGCTACCGGCGGATGGTGGAAGCGCGGATGGACCGTCTCGGTGAATTCCTCGAACGAACGGA
GCGGGACAGATGA

Upstream 100 bases:

>100_bases
TCCGGAGATCTCCGGTCAACCTACCGGGCGCGAGCGGATGTCGGGAGCAACCGCGCGCGAGGGGTTGACGTGGTCCGCCT
CATATCCGATACTGAACTAG

Downstream 100 bases:

>100_bases
GCACGACAACCAACGAAGCCACCGTCACCAAGAGCGGCGATCGGGAGATCCACGTGGAGCGGATCTTCAACGCCCCGGTC
GAGCGGGTCTGGGAGGCGTA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; ArsR Family Regulatory; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Transcriptional Regulator Arsr Domain Protein; Arsenical Resistance Operon Repressor; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVQYDFLDASFGALADPTRRGILERLARGPATVSELAEQFDMTLTGMKKHLRLLEEAGMIDTEKRGRVRYCRLGANVFDR
ELAWLQGYRRMVEARMDRLGEFLERTERDR

Sequences:

>Translated_110_residues
MVQYDFLDASFGALADPTRRGILERLARGPATVSELAEQFDMTLTGMKKHLRLLEEAGMIDTEKRGRVRYCRLGANVFDR
ELAWLQGYRRMVEARMDRLGEFLERTERDR
>Mature_110_residues
MVQYDFLDASFGALADPTRRGILERLARGPATVSELAEQFDMTLTGMKKHLRLLEEAGMIDTEKRGRVRYCRLGANVFDR
ELAWLQGYRRMVEARMDRLGEFLERTERDR

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12842; Mature: 12842

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQYDFLDASFGALADPTRRGILERLARGPATVSELAEQFDMTLTGMKKHLRLLEEAGMI
CCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTEKRGRVRYCRLGANVFDRELAWLQGYRRMVEARMDRLGEFLERTERDR
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVQYDFLDASFGALADPTRRGILERLARGPATVSELAEQFDMTLTGMKKHLRLLEEAGMI
CCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTEKRGRVRYCRLGANVFDRELAWLQGYRRMVEARMDRLGEFLERTERDR
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA