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The map label for this gene is lprB [H]

Identifier: 54027054

GI number: 54027054

Start: 5379112

End: 5379645

Strand: Reverse

Name: lprB [H]

Synonym: nfa50800

Alternate gene names: 54027054

Gene position: 5379645-5379112 (Counterclockwise)

Preceding gene: 54027055

Following gene: 54027053

Centisome position: 89.34

GC content: 68.35

Gene sequence:

>534_bases
GTGCCTGGCATGCGGATCCCGTCGGCGCTCATCACAGGTCTCGCCCTGGTCCTGACGTTGTCGGCGTGCGGTTCGGGGGG
CGATTCCGGCTCCGACACCCCGTTGCGCCCGCCGCCGAAGGTGGCCTCGCTCGGGCCGTTCGTCGGCGAGTGCGGGCACG
TCACCGACGACGAGGTACGCGACATCGCGGGCCTGGGCACGCTGTCGCAGGTGTTCAAGAACTCGGTGGGCTGCAACTAC
CAGTCCGCGGGCATCGGTTCGCCGAGTGTCACCTTCGCCTCCTATCGGGGCAGCCCGATCGAGCGGGAGAAGGCGTGGGT
GTCCAACGTCGGGCGGGCACCGGATGCGATCGAGGTGGGCGGTAGGCCGGGCTTCGCGGCGCTCGACCCGAGCGGCGCGG
TCTGCGATCTCGCCGTGCAGCTCGACGACGACTTCTTCGAGTGGTCGATGTCGTACGGGTTCTTCGGGCCGTTGGACAAC
CCGTGTGACAAGACCAGGAAGTTGGCCGAACTCACCGTGGCGCGGTTGAAGTGA

Upstream 100 bases:

>100_bases
ATCGAGCGAGAACAGGCGGCCCGGGGAAACCTGTAGCGCCGCAACGTCGCTCGTCGCGGCGCCGGCGAGACCCCGGAGGT
GCTGCGCGAACCCCGGTAGA

Downstream 100 bases:

>100_bases
GGGGTGGGGCGTTGATGGGCAGGGTTCCCGGTCGCCGGGCGGCGGCGCTGAGCGGCGCCGTGCTGGCGCTGGTCGCGATG
GTGGCCGGGTGCGGGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MPGMRIPSALITGLALVLTLSACGSGGDSGSDTPLRPPPKVASLGPFVGECGHVTDDEVRDIAGLGTLSQVFKNSVGCNY
QSAGIGSPSVTFASYRGSPIEREKAWVSNVGRAPDAIEVGGRPGFAALDPSGAVCDLAVQLDDDFFEWSMSYGFFGPLDN
PCDKTRKLAELTVARLK

Sequences:

>Translated_177_residues
MPGMRIPSALITGLALVLTLSACGSGGDSGSDTPLRPPPKVASLGPFVGECGHVTDDEVRDIAGLGTLSQVFKNSVGCNY
QSAGIGSPSVTFASYRGSPIEREKAWVSNVGRAPDAIEVGGRPGFAALDPSGAVCDLAVQLDDDFFEWSMSYGFFGPLDN
PCDKTRKLAELTVARLK
>Mature_176_residues
PGMRIPSALITGLALVLTLSACGSGGDSGSDTPLRPPPKVASLGPFVGECGHVTDDEVRDIAGLGTLSQVFKNSVGCNYQ
SAGIGSPSVTFASYRGSPIEREKAWVSNVGRAPDAIEVGGRPGFAALDPSGAVCDLAVQLDDDFFEWSMSYGFFGPLDNP
CDKTRKLAELTVARLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18438; Mature: 18307

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGMRIPSALITGLALVLTLSACGSGGDSGSDTPLRPPPKVASLGPFVGECGHVTDDEVR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHH
DIAGLGTLSQVFKNSVGCNYQSAGIGSPSVTFASYRGSPIEREKAWVSNVGRAPDAIEVG
HHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEC
GRPGFAALDPSGAVCDLAVQLDDDFFEWSMSYGFFGPLDNPCDKTRKLAELTVARLK
CCCCEEEECCCCCEEEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGMRIPSALITGLALVLTLSACGSGGDSGSDTPLRPPPKVASLGPFVGECGHVTDDEVR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHH
DIAGLGTLSQVFKNSVGCNYQSAGIGSPSVTFASYRGSPIEREKAWVSNVGRAPDAIEVG
HHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEC
GRPGFAALDPSGAVCDLAVQLDDDFFEWSMSYGFFGPLDNPCDKTRKLAELTVARLK
CCCCEEEECCCCCEEEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]