Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026893

Identifier: 54026893

GI number: 54026893

Start: 5137783

End: 5138217

Strand: Reverse

Name: 54026893

Synonym: nfa49190

Alternate gene names: NA

Gene position: 5138217-5137783 (Counterclockwise)

Preceding gene: 54026894

Following gene: 54026892

Centisome position: 85.34

GC content: 66.9

Gene sequence:

>435_bases
ATGACCTACACGATCGCGGTCCGCGGCGAGGCGATCTACGGCGGGCTGGTGGTACCGCGGGTGCGGCCGAGCTTCAAGGT
CAGCAACAGCGATCTGATCGAATTCCTCAAGGACCGGCTGCGGGACCGGGACGCGGGCGAGGAGCTGATGTACACCGTGT
ACGTGCCCGATCCCGCGGGCAACTACAACGCGATGGTGTGCTTCGAGTACGCCGAGCCCGGCCTGGTCCCGGTGGGTGAT
CTGCTCGTGCGGGTACCCAAGGGGGTGTACGCGCGGTTCGCGCCCAACGGCGACTATCACGATCCGGTGGAGGATGTGTG
GGCCCAGGTCGACGACGCCACCGCGTCCGCCGAGATCACCCGGGCCTACCGGGAGGAGATCGAGGTGTGGCGGGGCCGCG
ACCAGGTGGAACTCTACATCTCCATCCTCGTCTGA

Upstream 100 bases:

>100_bases
ACGCCGAGGAACACAAGCAGATCAAGCGCACCTACACCGGAGATTTCGAGTGCTATCCGCACGCCTACAAGATCGAGCTG
TATCTGGCGGTCGATCCACG

Downstream 100 bases:

>100_bases
TTAGCTCAGCGTTAACTGTCGATGAACCGACTGGTCTTCAGGTTCTGTCATGTCCAGCCGATTTAATTGGCTTGACCTGC
AGATTTAGTGGGTCGTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTYTIAVRGEAIYGGLVVPRVRPSFKVSNSDLIEFLKDRLRDRDAGEELMYTVYVPDPAGNYNAMVCFEYAEPGLVPVGD
LLVRVPKGVYARFAPNGDYHDPVEDVWAQVDDATASAEITRAYREEIEVWRGRDQVELYISILV

Sequences:

>Translated_144_residues
MTYTIAVRGEAIYGGLVVPRVRPSFKVSNSDLIEFLKDRLRDRDAGEELMYTVYVPDPAGNYNAMVCFEYAEPGLVPVGD
LLVRVPKGVYARFAPNGDYHDPVEDVWAQVDDATASAEITRAYREEIEVWRGRDQVELYISILV
>Mature_143_residues
TYTIAVRGEAIYGGLVVPRVRPSFKVSNSDLIEFLKDRLRDRDAGEELMYTVYVPDPAGNYNAMVCFEYAEPGLVPVGDL
LVRVPKGVYARFAPNGDYHDPVEDVWAQVDDATASAEITRAYREEIEVWRGRDQVELYISILV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16264; Mature: 16132

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTIAVRGEAIYGGLVVPRVRPSFKVSNSDLIEFLKDRLRDRDAGEELMYTVYVPDPAG
CEEEEEEECCEEECCEEECCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
NYNAMVCFEYAEPGLVPVGDLLVRVPKGVYARFAPNGDYHDPVEDVWAQVDDATASAEIT
CCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCHHHHHH
RAYREEIEVWRGRDQVELYISILV
HHHHHHHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure 
TYTIAVRGEAIYGGLVVPRVRPSFKVSNSDLIEFLKDRLRDRDAGEELMYTVYVPDPAG
EEEEEEECCEEECCEEECCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
NYNAMVCFEYAEPGLVPVGDLLVRVPKGVYARFAPNGDYHDPVEDVWAQVDDATASAEIT
CCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCHHHHHH
RAYREEIEVWRGRDQVELYISILV
HHHHHHHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA