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The map label for this gene is 54026892

Identifier: 54026892

GI number: 54026892

Start: 5136778

End: 5137374

Strand: Reverse

Name: 54026892

Synonym: nfa49180

Alternate gene names: NA

Gene position: 5137374-5136778 (Counterclockwise)

Preceding gene: 54026893

Following gene: 54026891

Centisome position: 85.32

GC content: 74.71

Gene sequence:

>597_bases
GTGTATCGGCAGTACGGCGTGGAATCGGCACTCGAATACGACCGGGTGTCCGACGGGCGATCCACGTCGCTGTTCTTCGC
CGCGGTCGATCCCGAGGGCGCGATCGTCGCGGGACTGCGCGCGCAGGGCCCCTACCGCAGCGCCGCCGAGGCGCACGGCC
TCGGCGCCTGGACCGGCAGGCCGGGAGAAGCCGCGCTGCGCACCATGATCGGCGACCGCATCGGTGAGGGCGTGGTCGAG
GCCAAGGCCGTCTGGGTGTCCCGCGAGGCCGCGCACCGGCCGCATCTGGGCGCGGCGGTGGCCCGCTGCGTCGTGCACTC
CGCCTGGTTGCTCGGCGCGCGGTGGGGTTTCGCGACCACGGCCGAACACAGCATCGCGCTGTATCGCTCCAGCGGCGGCC
GCGTCGCCGGCGAGATCGCCCCGGTGCCGTACCCGGACGAGCGCTACCGCACCGTCCCGCTCTGGTGGGACACCACCTCC
TACCGCCTGCACGCGACCCGGTCGCAGAGCGCGCTCACCATGATCGAGCGCGCCGCGCTGCGCGCGTGGGGCGTGCCGCG
GCCGGTGCTCGCGACGAAGGGCGGGGCGGCGCGATGA

Upstream 100 bases:

>100_bases
GTTGCGGTTTCGCGACATGCAATCCGGTTACGTCTTCCATGTGACTACTCCGGATGCCCATCCGGATCTGTGGCGGCGCT
ACCTCGGCGGAGCATTGCAG

Downstream 100 bases:

>100_bases
CCGACGAGGCCGACCAAGGCGCCGAGCACCGGCCACTGATCCTCGACGAGCACGCCGACGACGACGCCGCCGCGCTGGCC
CGGCTGCGCACCACCCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MYRQYGVESALEYDRVSDGRSTSLFFAAVDPEGAIVAGLRAQGPYRSAAEAHGLGAWTGRPGEAALRTMIGDRIGEGVVE
AKAVWVSREAAHRPHLGAAVARCVVHSAWLLGARWGFATTAEHSIALYRSSGGRVAGEIAPVPYPDERYRTVPLWWDTTS
YRLHATRSQSALTMIERAALRAWGVPRPVLATKGGAAR

Sequences:

>Translated_198_residues
MYRQYGVESALEYDRVSDGRSTSLFFAAVDPEGAIVAGLRAQGPYRSAAEAHGLGAWTGRPGEAALRTMIGDRIGEGVVE
AKAVWVSREAAHRPHLGAAVARCVVHSAWLLGARWGFATTAEHSIALYRSSGGRVAGEIAPVPYPDERYRTVPLWWDTTS
YRLHATRSQSALTMIERAALRAWGVPRPVLATKGGAAR
>Mature_198_residues
MYRQYGVESALEYDRVSDGRSTSLFFAAVDPEGAIVAGLRAQGPYRSAAEAHGLGAWTGRPGEAALRTMIGDRIGEGVVE
AKAVWVSREAAHRPHLGAAVARCVVHSAWLLGARWGFATTAEHSIALYRSSGGRVAGEIAPVPYPDERYRTVPLWWDTTS
YRLHATRSQSALTMIERAALRAWGVPRPVLATKGGAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21384; Mature: 21384

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRQYGVESALEYDRVSDGRSTSLFFAAVDPEGAIVAGLRAQGPYRSAAEAHGLGAWTGR
CCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCC
PGEAALRTMIGDRIGEGVVEAKAVWVSREAAHRPHLGAAVARCVVHSAWLLGARWGFATT
CHHHHHHHHHHHHHCCCHHHHHHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
AEHSIALYRSSGGRVAGEIAPVPYPDERYRTVPLWWDTTSYRLHATRSQSALTMIERAAL
CCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHH
RAWGVPRPVLATKGGAAR
HHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MYRQYGVESALEYDRVSDGRSTSLFFAAVDPEGAIVAGLRAQGPYRSAAEAHGLGAWTGR
CCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCC
PGEAALRTMIGDRIGEGVVEAKAVWVSREAAHRPHLGAAVARCVVHSAWLLGARWGFATT
CHHHHHHHHHHHHHCCCHHHHHHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
AEHSIALYRSSGGRVAGEIAPVPYPDERYRTVPLWWDTTSYRLHATRSQSALTMIERAAL
CCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHH
RAWGVPRPVLATKGGAAR
HHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]