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The map label for this gene is 54026885

Identifier: 54026885

GI number: 54026885

Start: 5125360

End: 5126940

Strand: Reverse

Name: 54026885

Synonym: nfa49110

Alternate gene names: NA

Gene position: 5126940-5125360 (Counterclockwise)

Preceding gene: 54026889

Following gene: 54026882

Centisome position: 85.15

GC content: 70.34

Gene sequence:

>1581_bases
GTGACCGACCGCGCGACCGCACCCGGGGCCGTGGCCACCTGGTCGAGCCCCGCCCCGCTCCGCCCGACACCGGATTTCGG
CCCGACCGACCGGTTGCGCGGCTGGCTGGTCACGCTGGTACTCACCGCACTGGCGGCGGTGACGAGGTTCAGCGCGCTGA
ACTACCCGACCGACGCGGGCACCCCGGTCTTCGACGAGAAGCATTACGCCCCGCAGGCCTGGCAGATGCTCACCGGCGGC
GGCGTGGAGGACAACCCCGGCTACGGGCTGGTGGTCCATCCGCCGGTCGGCAAACAGATGATCGCCATCGGCGAGTTCCT
GTTCGGCTACAACGGCTGGGGGTGGCGGTTCACCGCGGCGCTGGCGGGCACGTTGCTGGTGCTGCTTGTCATCCGGATCG
TGCGCAGGATGACCCGCTCGACGCTGATCGGCGCGATCGCGGGCATCCTGATGATCGCCGACGGCCTGCTGTATGTGTCC
TCGCGCATCGGGATGCTGGACATCTTCATGGCGCTGTTCGTCACCGCCGCGTTCGGCTGTCTGATCGTCGACCGCGACGA
CGTGCGGGCCCGGCTGGCCCGCGCCGACGCCGAGGGCCGGGCCGCGCTCACGGCGTGGGGGCCGCGGCTGGGCGTGCGCT
GGTGGCGGTTCGGTGCGGGCGTGCTGCTGGGGCTGGCGTGCGGGACGAAATGGTCGGGCCTGTATTTCGTCGCGGCGTTC
GGCATCCTCAGCGTCTGTTTCGACCTGGCCGCGCGGGGGGCCTACGGGGTGCCGAGCCCGTGGCGGGGCACGGCGCTGCG
TGATGTGGGTCCGGCGCTATATGCGCTGGTGGTGGTCCCGCTCGGGGTGTACCTGGCGACCTACTGGGCCTGGTTCGCCA
GCGAGATCGGCGTCTACCGGCACGCCGTCGGCAACCAGATCGGCACGGACGGGCGGTGGTCGTTCCTGCCCGACGCGCTG
CGCTCGCTGTGGTTCTACAGCGGGGAATCACTGCACTTCCACGAGGGCCTGACGAACTCGGCGGGCAACCATCATCCGTG
GGAGTCCAAGCCGTGGACCTGGCCGATGGGCCTGCGCCCGATGCTGTACTACTACGCCGACAACGTCAACGGGTGCGAGC
CCGGCCAGTGCGTGAAGGCCGTGATGCTGATCGGCAATCCGGCGATCTGGTGGATCGCGCTGCCGGTACTGGCCTGGGCG
CTGTGGCGCAGCGTGGTGCGCCGTGACTGGCGCTATGCCGCCGTGCTCACCGGATATGCCGCCGCGCTGTTGCCCTGGTT
CCTCACCCTGGACCGGCAGATGTACTACTTCTACGCGGTGCCGCTGGCCCCGTTCCTGATGATGGCGGTGGCGCTGATGC
TCGGTGACGTGATCGGCCCCGCCCGCGCGGCTCCGCGCCGCGTCGCCGACCCGCACGCCTTCGCCCTGCCCGATGAACGG
CACAGCCTGGGTCTGCTCGCGGTCTGCCTGTATCTGGGCCTGGTGGTGGCCGCGTTCGTGTGGTTCTGGCCGATCATGTC
GGCCATGGCGATCACCCCGGACGAGTGGCACGTCCGGCTCTGGCTGCCCAGCTGGCGCTAG

Upstream 100 bases:

>100_bases
AGCCTAATCGGGCCGAGGAGTACCGCGAACGGGTGACTCCGCCCGAGCGCCGGACGACGCGTGGACACCCCGACCGCATA
CGATCGGGGTCGTGACCCAG

Downstream 100 bases:

>100_bases
CCGCGGCGTTCATCACCGGGTGCCGACCCGCTGGGCCGGCCAAGGGCGGCCCGCAGGTAGTGCAGCGCGTCCTCGTCGTC
GAGGCCGAGCCTGCGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MTDRATAPGAVATWSSPAPLRPTPDFGPTDRLRGWLVTLVLTALAAVTRFSALNYPTDAGTPVFDEKHYAPQAWQMLTGG
GVEDNPGYGLVVHPPVGKQMIAIGEFLFGYNGWGWRFTAALAGTLLVLLVIRIVRRMTRSTLIGAIAGILMIADGLLYVS
SRIGMLDIFMALFVTAAFGCLIVDRDDVRARLARADAEGRAALTAWGPRLGVRWWRFGAGVLLGLACGTKWSGLYFVAAF
GILSVCFDLAARGAYGVPSPWRGTALRDVGPALYALVVVPLGVYLATYWAWFASEIGVYRHAVGNQIGTDGRWSFLPDAL
RSLWFYSGESLHFHEGLTNSAGNHHPWESKPWTWPMGLRPMLYYYADNVNGCEPGQCVKAVMLIGNPAIWWIALPVLAWA
LWRSVVRRDWRYAAVLTGYAAALLPWFLTLDRQMYYFYAVPLAPFLMMAVALMLGDVIGPARAAPRRVADPHAFALPDER
HSLGLLAVCLYLGLVVAAFVWFWPIMSAMAITPDEWHVRLWLPSWR

Sequences:

>Translated_526_residues
MTDRATAPGAVATWSSPAPLRPTPDFGPTDRLRGWLVTLVLTALAAVTRFSALNYPTDAGTPVFDEKHYAPQAWQMLTGG
GVEDNPGYGLVVHPPVGKQMIAIGEFLFGYNGWGWRFTAALAGTLLVLLVIRIVRRMTRSTLIGAIAGILMIADGLLYVS
SRIGMLDIFMALFVTAAFGCLIVDRDDVRARLARADAEGRAALTAWGPRLGVRWWRFGAGVLLGLACGTKWSGLYFVAAF
GILSVCFDLAARGAYGVPSPWRGTALRDVGPALYALVVVPLGVYLATYWAWFASEIGVYRHAVGNQIGTDGRWSFLPDAL
RSLWFYSGESLHFHEGLTNSAGNHHPWESKPWTWPMGLRPMLYYYADNVNGCEPGQCVKAVMLIGNPAIWWIALPVLAWA
LWRSVVRRDWRYAAVLTGYAAALLPWFLTLDRQMYYFYAVPLAPFLMMAVALMLGDVIGPARAAPRRVADPHAFALPDER
HSLGLLAVCLYLGLVVAAFVWFWPIMSAMAITPDEWHVRLWLPSWR
>Mature_525_residues
TDRATAPGAVATWSSPAPLRPTPDFGPTDRLRGWLVTLVLTALAAVTRFSALNYPTDAGTPVFDEKHYAPQAWQMLTGGG
VEDNPGYGLVVHPPVGKQMIAIGEFLFGYNGWGWRFTAALAGTLLVLLVIRIVRRMTRSTLIGAIAGILMIADGLLYVSS
RIGMLDIFMALFVTAAFGCLIVDRDDVRARLARADAEGRAALTAWGPRLGVRWWRFGAGVLLGLACGTKWSGLYFVAAFG
ILSVCFDLAARGAYGVPSPWRGTALRDVGPALYALVVVPLGVYLATYWAWFASEIGVYRHAVGNQIGTDGRWSFLPDALR
SLWFYSGESLHFHEGLTNSAGNHHPWESKPWTWPMGLRPMLYYYADNVNGCEPGQCVKAVMLIGNPAIWWIALPVLAWAL
WRSVVRRDWRYAAVLTGYAAALLPWFLTLDRQMYYFYAVPLAPFLMMAVALMLGDVIGPARAAPRRVADPHAFALPDERH
SLGLLAVCLYLGLVVAAFVWFWPIMSAMAITPDEWHVRLWLPSWR

Specific function: Unknown

COG id: COG1928

COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 58065; Mature: 57934

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRATAPGAVATWSSPAPLRPTPDFGPTDRLRGWLVTLVLTALAAVTRFSALNYPTDAG
CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TPVFDEKHYAPQAWQMLTGGGVEDNPGYGLVVHPPVGKQMIAIGEFLFGYNGWGWRFTAA
CCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHH
LAGTLLVLLVIRIVRRMTRSTLIGAIAGILMIADGLLYVSSRIGMLDIFMALFVTAAFGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCE
LIVDRDDVRARLARADAEGRAALTAWGPRLGVRWWRFGAGVLLGLACGTKWSGLYFVAAF
EEECCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GILSVCFDLAARGAYGVPSPWRGTALRDVGPALYALVVVPLGVYLATYWAWFASEIGVYR
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAVGNQIGTDGRWSFLPDALRSLWFYSGESLHFHEGLTNSAGNHHPWESKPWTWPMGLRP
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
MLYYYADNVNGCEPGQCVKAVMLIGNPAIWWIALPVLAWALWRSVVRRDWRYAAVLTGYA
HHHEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
AALLPWFLTLDRQMYYFYAVPLAPFLMMAVALMLGDVIGPARAAPRRVADPHAFALPDER
HHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
HSLGLLAVCLYLGLVVAAFVWFWPIMSAMAITPDEWHVRLWLPSWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TDRATAPGAVATWSSPAPLRPTPDFGPTDRLRGWLVTLVLTALAAVTRFSALNYPTDAG
CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TPVFDEKHYAPQAWQMLTGGGVEDNPGYGLVVHPPVGKQMIAIGEFLFGYNGWGWRFTAA
CCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHH
LAGTLLVLLVIRIVRRMTRSTLIGAIAGILMIADGLLYVSSRIGMLDIFMALFVTAAFGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCE
LIVDRDDVRARLARADAEGRAALTAWGPRLGVRWWRFGAGVLLGLACGTKWSGLYFVAAF
EEECCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GILSVCFDLAARGAYGVPSPWRGTALRDVGPALYALVVVPLGVYLATYWAWFASEIGVYR
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAVGNQIGTDGRWSFLPDALRSLWFYSGESLHFHEGLTNSAGNHHPWESKPWTWPMGLRP
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
MLYYYADNVNGCEPGQCVKAVMLIGNPAIWWIALPVLAWALWRSVVRRDWRYAAVLTGYA
HHHEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
AALLPWFLTLDRQMYYFYAVPLAPFLMMAVALMLGDVIGPARAAPRRVADPHAFALPDER
HHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
HSLGLLAVCLYLGLVVAAFVWFWPIMSAMAITPDEWHVRLWLPSWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]