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The map label for this gene is yjjA [H]

Identifier: 54026532

GI number: 54026532

Start: 4739059

End: 4740297

Strand: Reverse

Name: yjjA [H]

Synonym: nfa45590

Alternate gene names: 54026532

Gene position: 4740297-4739059 (Counterclockwise)

Preceding gene: 54026533

Following gene: 54026531

Centisome position: 78.73

GC content: 74.66

Gene sequence:

>1239_bases
ATGAGCACTATCGACGCGGGCGCCCCCCTCGCCGGATTCACCGTCGGCATCACGGCGGCGCGGCGCGCCGAGGAATTCGC
CACCCTGTTGACCCGGCGGGGCGCGACCATCGTGTCCGCACCGGCCATCCGCATCATTCCGCTGGCCGACGACACCGAAC
TCGAGCGGGTCACCCGCACGCTGGTCGCCGAACCGCCGCAGATCGCCGTGGCCACCACCGGCATCGGTTTCCGCGGCTGG
ATGGAGGCCGCCGAGGGCTGGGGGCTGGCCGAGTACCTGCGCGGCACCCTGGCCGGGACCAGGTTGCTGGCCCGCGGCCC
GAAGGCCAAGGGCGCGATCCGGGCCGCCGAACTGCGCGAGGAGTGGTCGCCGGCCTCGGAATCCTCCGCCGAGGTACTCG
ACCACCTGCTCGCCGAGGGCGTGGAGGGGGTGCGGATCGCGGTGCAGTTGCACGGGGCCACCACCGAATGGGAGCCGGTG
CCCGACTTCTGCGAGGTGTTGCGCTGCGCCGGGGCCGATGTGGTGCCGGTGCCGGTGTACCGCTGGATTCCGCCCGCCGA
CCAGGGGCCGATGGATCAGCTGATCGAGGCGATCGTCACCGCGAGCCTGGACTGCGTGACCTTCACCAGCGCGCCCGCGG
TGGCCTCGATGCTGATGCGCGCCAAGGAAACCGGGCTGCTGGAAGGCGTGCTGCACGCCCTGCGCACCCGGGTGCTGCCC
GCGTGCGTCGGCCCGATCACCGCCGCGCCGCTGGAAGAACTCGGCGTGCCGACCTCCATGCCCGGCCGGGCCCGGCTGGG
CGCGCTGGCCCGCCATGTGGCCGAGGAGCTGCCGCGCCGCGCCAACCGCATCCAGGCCGCCGGGCACACCATCAGTGTGC
GCGGTGGGTGCGTGGTCGTCGACGGACAGGTGCGCCAGCTCGCGCCCGCCCCGATGGCGTTGATGCGCTCGCTGGCCCGC
CAGCCCGGCCGCGTGGTCTCGCGCGAAGACCTGCTCGCCGCGCTGCCCGGCGGCGGTGAGGACACGCACGCGGTGGAGAC
CGCCATCGCCCGGCTGCGCGCCGGACTCGGCACGCCCAAGGCGATCCAGACCGTGGTCAAGCGCGGCTACCGGCTGGCGC
TCGACACCGCCGACTGCGCCGACGACAACGCCGTGCCGCCGCGCGCGCCCGCCCGCACCCCGTCGGTGGGCACCCCGCTG
CGGTCGGCGCGGTACGCGCAGCCGTTGGGGTCGTGGTGA

Upstream 100 bases:

>100_bases
TCGGCGGCGCTGCCGGTGTATGCGGTGCGCGTCGACGACGGCATCGTCTCGGTATCCAACGAGCCGGTCGCGCTCGAATC
CTCGGACGGATGAACCACCT

Downstream 100 bases:

>100_bases
ACGCGCCCGCCCTGGTGCTGGTCGCGCACGGCACCAGGAGCACCCGGGGGGTCGAGATGATCGCCGCGCTCGCCGAGGCG
GTCTCGCGGGAGCTGCGCGG

Product: bifunctional uroporphyrinogen-III synthetase/response regulator domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSTIDAGAPLAGFTVGITAARRAEEFATLLTRRGATIVSAPAIRIIPLADDTELERVTRTLVAEPPQIAVATTGIGFRGW
MEAAEGWGLAEYLRGTLAGTRLLARGPKAKGAIRAAELREEWSPASESSAEVLDHLLAEGVEGVRIAVQLHGATTEWEPV
PDFCEVLRCAGADVVPVPVYRWIPPADQGPMDQLIEAIVTASLDCVTFTSAPAVASMLMRAKETGLLEGVLHALRTRVLP
ACVGPITAAPLEELGVPTSMPGRARLGALARHVAEELPRRANRIQAAGHTISVRGGCVVVDGQVRQLAPAPMALMRSLAR
QPGRVVSREDLLAALPGGGEDTHAVETAIARLRAGLGTPKAIQTVVKRGYRLALDTADCADDNAVPPRAPARTPSVGTPL
RSARYAQPLGSW

Sequences:

>Translated_412_residues
MSTIDAGAPLAGFTVGITAARRAEEFATLLTRRGATIVSAPAIRIIPLADDTELERVTRTLVAEPPQIAVATTGIGFRGW
MEAAEGWGLAEYLRGTLAGTRLLARGPKAKGAIRAAELREEWSPASESSAEVLDHLLAEGVEGVRIAVQLHGATTEWEPV
PDFCEVLRCAGADVVPVPVYRWIPPADQGPMDQLIEAIVTASLDCVTFTSAPAVASMLMRAKETGLLEGVLHALRTRVLP
ACVGPITAAPLEELGVPTSMPGRARLGALARHVAEELPRRANRIQAAGHTISVRGGCVVVDGQVRQLAPAPMALMRSLAR
QPGRVVSREDLLAALPGGGEDTHAVETAIARLRAGLGTPKAIQTVVKRGYRLALDTADCADDNAVPPRAPARTPSVGTPL
RSARYAQPLGSW
>Mature_411_residues
STIDAGAPLAGFTVGITAARRAEEFATLLTRRGATIVSAPAIRIIPLADDTELERVTRTLVAEPPQIAVATTGIGFRGWM
EAAEGWGLAEYLRGTLAGTRLLARGPKAKGAIRAAELREEWSPASESSAEVLDHLLAEGVEGVRIAVQLHGATTEWEPVP
DFCEVLRCAGADVVPVPVYRWIPPADQGPMDQLIEAIVTASLDCVTFTSAPAVASMLMRAKETGLLEGVLHALRTRVLPA
CVGPITAAPLEELGVPTSMPGRARLGALARHVAEELPRRANRIQAAGHTISVRGGCVVVDGQVRQLAPAPMALMRSLARQ
PGRVVSREDLLAALPGGGEDTHAVETAIARLRAGLGTPKAIQTVVKRGYRLALDTADCADDNAVPPRAPARTPSVGTPLR
SARYAQPLGSW

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003754 [H]

Pfam domain/function: PF02602 HEM4 [H]

EC number: NA

Molecular weight: Translated: 43380; Mature: 43249

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIDAGAPLAGFTVGITAARRAEEFATLLTRRGATIVSAPAIRIIPLADDTELERVTRT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCHHHHHHHHH
LVAEPPQIAVATTGIGFRGWMEAAEGWGLAEYLRGTLAGTRLLARGPKAKGAIRAAELRE
HHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EWSPASESSAEVLDHLLAEGVEGVRIAVQLHGATTEWEPVPDFCEVLRCAGADVVPVPVY
HCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEECCCCE
RWIPPADQGPMDQLIEAIVTASLDCVTFTSAPAVASMLMRAKETGLLEGVLHALRTRVLP
ECCCCCCCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACVGPITAAPLEELGVPTSMPGRARLGALARHVAEELPRRANRIQAAGHTISVRGGCVVV
HHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEE
DGQVRQLAPAPMALMRSLARQPGRVVSREDLLAALPGGGEDTHAVETAIARLRAGLGTPK
CCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHH
AIQTVVKRGYRLALDTADCADDNAVPPRAPARTPSVGTPLRSARYAQPLGSW
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
STIDAGAPLAGFTVGITAARRAEEFATLLTRRGATIVSAPAIRIIPLADDTELERVTRT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCHHHHHHHHH
LVAEPPQIAVATTGIGFRGWMEAAEGWGLAEYLRGTLAGTRLLARGPKAKGAIRAAELRE
HHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EWSPASESSAEVLDHLLAEGVEGVRIAVQLHGATTEWEPVPDFCEVLRCAGADVVPVPVY
HCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEECCCCE
RWIPPADQGPMDQLIEAIVTASLDCVTFTSAPAVASMLMRAKETGLLEGVLHALRTRVLP
ECCCCCCCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACVGPITAAPLEELGVPTSMPGRARLGALARHVAEELPRRANRIQAAGHTISVRGGCVVV
HHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEE
DGQVRQLAPAPMALMRSLARQPGRVVSREDLLAALPGGGEDTHAVETAIARLRAGLGTPK
CCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCHH
AIQTVVKRGYRLALDTADCADDNAVPPRAPARTPSVGTPLRSARYAQPLGSW
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]