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The map label for this gene is sirB [H]

Identifier: 54026531

GI number: 54026531

Start: 4738343

End: 4739062

Strand: Reverse

Name: sirB [H]

Synonym: nfa45580

Alternate gene names: 54026531

Gene position: 4739062-4738343 (Counterclockwise)

Preceding gene: 54026532

Following gene: 54026530

Centisome position: 78.71

GC content: 75.97

Gene sequence:

>720_bases
GTGAACGCGCCCGCCCTGGTGCTGGTCGCGCACGGCACCAGGAGCACCCGGGGGGTCGAGATGATCGCCGCGCTCGCCGA
GGCGGTCTCGCGGGAGCTGCGCGGACCGGTGGTGCGCACCGCGTTCGTCGACGTGCTCGGCCCTTCGCCCGCCGAGGTGC
TGCGGAACCTGCGCGCCACCGCGCCGGGCACGCCCGCCGTGGTGATTCCGGCCTTCCTGGCCTCGGGTTATCACGTCTAC
CAGGACGTTCCGCGGGAAGTGGCGGAGAGCGCGCATCCGGCCGCGACGGTGACCCCGGCGATGGGGCCCGATCCCGCGCT
GGCCCGGATCATGGCGCTGCGCGTGCGGGCGGCCGGCTGGCGACCCGGCGACGCGGTCGTCGTCGCGGCGGCCGGATCCT
CCGATCCGCGCGCGCGGGCCGACGTGCGCCGCGCGGCCGCGCTGCTGGCCGAGCAGCTGCACGCGCCGGTGCGGATCGGT
TATGTGGCCACCGGCGCGCCGCGGGTCCCGGAAGTGGTTGCCGATCTTCGCGATTCGGGCGCCGACCGGGTGTTCGTCGC
CTCCTATCTGCTGGCGCACGGGCTGTTCCAGCAGCGCCTGCACGAGGCGGGCGCGGACGGTGTGGCGGCGCCGATCGGCG
TGCATCCCGCCGTCGTCCGGTTGCTGGCCGAGCGCTACCGCAGTGCCGCGGCCGAATCCGTCGCGGTGCGGGTGCGCTGA

Upstream 100 bases:

>100_bases
GCGCCGACGACAACGCCGTGCCGCCGCGCGCGCCCGCCCGCACCCCGTCGGTGGGCACCCCGCTGCGGTCGGCGCGGTAC
GCGCAGCCGTTGGGGTCGTG

Downstream 100 bases:

>100_bases
ATTCTCCTCGCGGTTCGCCCCTTTCCGGCGCGGCGCGGACTACCCTCGGAGACATGGCCGAGCGGGAGCGCGTGCCGGAG
CGGGCACGGGAGCGAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNAPALVLVAHGTRSTRGVEMIAALAEAVSRELRGPVVRTAFVDVLGPSPAEVLRNLRATAPGTPAVVIPAFLASGYHVY
QDVPREVAESAHPAATVTPAMGPDPALARIMALRVRAAGWRPGDAVVVAAAGSSDPRARADVRRAAALLAEQLHAPVRIG
YVATGAPRVPEVVADLRDSGADRVFVASYLLAHGLFQQRLHEAGADGVAAPIGVHPAVVRLLAERYRSAAAESVAVRVR

Sequences:

>Translated_239_residues
MNAPALVLVAHGTRSTRGVEMIAALAEAVSRELRGPVVRTAFVDVLGPSPAEVLRNLRATAPGTPAVVIPAFLASGYHVY
QDVPREVAESAHPAATVTPAMGPDPALARIMALRVRAAGWRPGDAVVVAAAGSSDPRARADVRRAAALLAEQLHAPVRIG
YVATGAPRVPEVVADLRDSGADRVFVASYLLAHGLFQQRLHEAGADGVAAPIGVHPAVVRLLAERYRSAAAESVAVRVR
>Mature_239_residues
MNAPALVLVAHGTRSTRGVEMIAALAEAVSRELRGPVVRTAFVDVLGPSPAEVLRNLRATAPGTPAVVIPAFLASGYHVY
QDVPREVAESAHPAATVTPAMGPDPALARIMALRVRAAGWRPGDAVVVAAAGSSDPRARADVRRAAALLAEQLHAPVRIG
YVATGAPRVPEVVADLRDSGADRVFVASYLLAHGLFQQRLHEAGADGVAAPIGVHPAVVRLLAERYRSAAAESVAVRVR

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 24873; Mature: 24873

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPALVLVAHGTRSTRGVEMIAALAEAVSRELRGPVVRTAFVDVLGPSPAEVLRNLRAT
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCC
APGTPAVVIPAFLASGYHVYQDVPREVAESAHPAATVTPAMGPDPALARIMALRVRAAGW
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCC
RPGDAVVVAAAGSSDPRARADVRRAAALLAEQLHAPVRIGYVATGAPRVPEVVADLRDSG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
ADRVFVASYLLAHGLFQQRLHEAGADGVAAPIGVHPAVVRLLAERYRSAAAESVAVRVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MNAPALVLVAHGTRSTRGVEMIAALAEAVSRELRGPVVRTAFVDVLGPSPAEVLRNLRAT
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCC
APGTPAVVIPAFLASGYHVYQDVPREVAESAHPAATVTPAMGPDPALARIMALRVRAAGW
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCC
RPGDAVVVAAAGSSDPRARADVRRAAALLAEQLHAPVRIGYVATGAPRVPEVVADLRDSG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
ADRVFVASYLLAHGLFQQRLHEAGADGVAAPIGVHPAVVRLLAERYRSAAAESVAVRVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]