| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026530
Identifier: 54026530
GI number: 54026530
Start: 4738017
End: 4738289
Strand: Reverse
Name: 54026530
Synonym: nfa45570
Alternate gene names: NA
Gene position: 4738289-4738017 (Counterclockwise)
Preceding gene: 54026531
Following gene: 54026529
Centisome position: 78.69
GC content: 77.66
Gene sequence:
>273_bases ATGGCCGAGCGGGAGCGCGTGCCGGAGCGGGCACGGGAGCGAATACTGCGCGATCACGCGCGCACCGTCGCGCGCCGGGT GGCCTCGGGCGCGGCATGCGAGGTGACCGTGGCGGGCAGGCGGCTGTCGGTGCTGGCGCCGCGGCGAAAATCCTGCCCCG ACTGGGTCCGGCTGCGGGTCGCGGTGCCGCACGCCGAATCCCTGCGGCCCCGGCTCGATCACGCCCTGACCCTGGCCGCG CGCGACGAGCGCCCCGACGGGCCCGCGCTCTGA
Upstream 100 bases:
>100_bases GCTACCGCAGTGCCGCGGCCGAATCCGTCGCGGTGCGGGTGCGCTGAATTCTCCTCGCGGTTCGCCCCTTTCCGGCGCGG CGCGGACTACCCTCGGAGAC
Downstream 100 bases:
>100_bases CACGCCGAGCCGACGAGCGGCGATGACGAAAGCCGGACACACCGTCTGCCGGTGCGCGAGACTGGTGGCATGCGTCGGCT CGTGAGCTGTTCGATTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAERERVPERARERILRDHARTVARRVASGAACEVTVAGRRLSVLAPRRKSCPDWVRLRVAVPHAESLRPRLDHALTLAA RDERPDGPAL
Sequences:
>Translated_90_residues MAERERVPERARERILRDHARTVARRVASGAACEVTVAGRRLSVLAPRRKSCPDWVRLRVAVPHAESLRPRLDHALTLAA RDERPDGPAL >Mature_89_residues AERERVPERARERILRDHARTVARRVASGAACEVTVAGRRLSVLAPRRKSCPDWVRLRVAVPHAESLRPRLDHALTLAAR DERPDGPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10121; Mature: 9990
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERERVPERARERILRDHARTVARRVASGAACEVTVAGRRLSVLAPRRKSCPDWVRLRV CCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHEEEE AVPHAESLRPRLDHALTLAARDERPDGPAL ECCCHHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure AERERVPERARERILRDHARTVARRVASGAACEVTVAGRRLSVLAPRRKSCPDWVRLRV CCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCHHEEEE AVPHAESLRPRLDHALTLAARDERPDGPAL ECCCHHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA