| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026158
Identifier: 54026158
GI number: 54026158
Start: 4334610
End: 4335362
Strand: Reverse
Name: 54026158
Synonym: nfa41870
Alternate gene names: NA
Gene position: 4335362-4334610 (Counterclockwise)
Preceding gene: 54026160
Following gene: 54026157
Centisome position: 72.0
GC content: 72.64
Gene sequence:
>753_bases GTGAGCATGTATCGGGTTTTCGAGGCGCTCGACGAGCTGGTGGCGATCGTCGAGGAGGCGCGCGGCATCCCGCCGACCCG CAGCTGCATCGTGCCCCGCGGCGACGTGCTCGACCTGCTCGACGATGTGCGTGACGCGCTGCCCGGCGAACTCGACGACG CCCAGGACGTGCTCGATCACCGGGACAAGATCGTCTCCGATGCCCGCACGGCCGCCGAGACCACCGTCACCTCGGCCGAC GAGCAGGCCCGCGACACCATCGACTCCGCTCGCGAGGAGGCCGACCGCATCCTGGCCGACGCCAAGGCGCACGCCGATCG CATGGTCGCCGAGGCGAGCGCGCACGCCGACCACCTGGTCACCACCGCCCAGGCCGAGGCCGAGCGGATCGTGGCCGAGG CCAAGGCCGAGTACGAAACCGTCACCGGCCGGGCGCGCGCCGAGGCGGACCGGATGATCGAGTCCGGCAAGGCCTCCTAC GAGCGGTCGGTGGCCGAGGGCGAGGCCGAACAGGCCCGCCTGGTCGCCCAGACCGAGGTGGTGCGGGCCGCGCACGCGGA GTCCGCGCGGATCATCGACACCGCGCAGGCCGAGGCGGACCGGATGCGCGACGAGTGCGACCACTACGTCGACTCGACGC TGGCGCAGTTCGAGGAGACCCTCAACAGCACGCTGCGCACCGTCGGCCGCGGCAGGCACCAGCTGCGCAGCGGTGCGGGC GCCCCGGACTACGCCACCGACTACCGTCGCTGA
Upstream 100 bases:
>100_bases CCGGACCGAGACTCGGCAGAACCGGTGACGAGGGGCACACTGGGCCACGGGCGCGCGTGTCCGCGACGGGGTACTCCGCG ACAGGAACGACTAGAGGTTG
Downstream 100 bases:
>100_bases TCTCACCCCGGCCGCAGGTCGGCGGCGTTCGCTCCGCCCGCGGCCACCGCGGCGATTTTTGGCAGACCGCGGCGCCCGGC GTATTGTGGAGTGGTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDHRDKIVSDARTAAETTVTSAD EQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLVTTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASY ERSVAEGEAEQARLVAQTEVVRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG APDYATDYRR
Sequences:
>Translated_250_residues MSMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDHRDKIVSDARTAAETTVTSAD EQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLVTTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASY ERSVAEGEAEQARLVAQTEVVRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG APDYATDYRR >Mature_249_residues SMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDHRDKIVSDARTAAETTVTSADE QARDTIDSAREEADRILADAKAHADRMVAEASAHADHLVTTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASYE RSVAEGEAEQARLVAQTEVVRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAGA PDYATDYRR
Specific function: Unknown
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2927c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27394; Mature: 27263
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH RDKIVSDARTAAETTVTSADEQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASYERSVAEGEAEQARLVAQTEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH VRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APDYATDYRR CCCCCCCCCC >Mature Secondary Structure SMYRVFEALDELVAIVEEARGIPPTRSCIVPRGDVLDLLDDVRDALPGELDDAQDVLDH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH RDKIVSDARTAAETTVTSADEQARDTIDSAREEADRILADAKAHADRMVAEASAHADHLV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTAQAEAERIVAEAKAEYETVTGRARAEADRMIESGKASYERSVAEGEAEQARLVAQTEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH VRAAHAESARIIDTAQAEADRMRDECDHYVDSTLAQFEETLNSTLRTVGRGRHQLRSGAG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APDYATDYRR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]