| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is pamO [H]
Identifier: 54026068
GI number: 54026068
Start: 4248430
End: 4250040
Strand: Reverse
Name: pamO [H]
Synonym: nfa40970
Alternate gene names: 54026068
Gene position: 4250040-4248430 (Counterclockwise)
Preceding gene: 54026069
Following gene: 54026067
Centisome position: 70.58
GC content: 68.22
Gene sequence:
>1611_bases GTGAGCACCGAATTCGATGCCGTGGTGGTCGGAGCCGGGATCTCGGGCCTGTACGCGGTGTACAAACTGCGGCAGCGCGG GATGCGGGTGCGGGGCTTCGAGTCCGCCGAGGGGCTGGGTGGCACCTGGTATCACAACCGGTATCCGGGCGCCCGGTGCG ATGTGGAGAGCATCGACTACTCGTATTCGTTCGACGAGGAGTTGCAGCAGGAGTGGACCTGGTCGGAGCGGTTCGCGACG CAGGAAGAGATCCTGCGGTATCTCGAGCACGTCGCCGACCGGCACGATCTGCGCTCGGCCTACGAGTTCTCGACCCGGGT GACCGCGGCGGTCTTCGACGAACAGACGGCGCGGTGGACGGTCTCCACCGACACCGGCCGAACGGTGACGGCCCGCTACT GCGTGCTCGCCACGGGTGTGTTGTCGGCGACGAACAAACCCGACATCCCCGGCCGGGACAGTTTCGGCGGGGAGCTGTAC CACACCGGTGAGTGGCCGCACGAGCCGGTGCGTTTCGCCGGCAAGCGCGTGGGCGTGATCGGCACCGGATCGTCGGGGAT CCAGGCGATTCCGGTGATCGCCGAGGAGGCCGCGCAGGTGGTGGTGTTCCAGCGCAGCCCGAACTATTCGATCCCGGCGG GCAACCGGCGGTTGGATCCGGAGTTCGTGGCCGAGGTGAAGGCCAATTACGCGGAGCGGCGGCGGCTGTCGCGGATCAGC GGGGGCGGCACGCCGAACAGTCCGTATCCCAAGGGTGCGCTCGAGGTCGACGAGGCCGAGCGCAGGCGGATCTACGACCA GTGGTGGCAGCGGGGCGGCTACCTGTTCGCCAAGGCGTTCCCGGACCAGACGACGAACCCGGCGGCGAACGACACCGCGC GCGAGTACGTCGAGGCCAAGATCCGGGAGATGGTGGCCGACCCGGAGATCGCCGAGCAGTTGATCCCGACCGACCATCCG ATCGGCACCAAGCGGATCGTCACCGACACCGGCTATTTCCAGACCTACAACCGCGACAACGTCACCCTGGTGAACCTGCG GCGGACTCCGATCGAGGAGATCACCGCGACCGGTGTGCGCACCAGCGGCGGGTCCTACGAGTTGGACATGCTGATCTTCG CGACCGGGTTCGACGCGATGACCGGCTCGCTGCTGCGGATCGACATCCGCGGCCGCGGCGGGCGGGAGTTGCGGCAGGAA TGGGCGGCAGGCCCGCGCACCTACCTGGGCCTGGCGGTGGCGGGCTTCCCGAACATGTTCATCCTGGCCGGGCCGGGCAG CCCCAGCGTGCTGGCGAACATGGTGCTGGTGGCCGAGCAGCACGTGGACTGGATCGCGCGCTGCCTGGATCATCTCGACG AGCACAACGTGACCACCATCGAGGCCGGTGCCGAGGCGGTGGACCAGTGGGTGGCCGAGTGCAACACCAAGGCCGCGGCC ACGTTGTTCCCGCAGGCCAACTCCTGGTATCTGGGCGCCAACATCCCCGGGAAGCCGCGGGTGTTCATGCCCTACATCGG CGGGTTCGGCAACTACAGCCAGATCTGCGACGAGGTGGCCGCCGCCGGGTACAAGGGCTTCGTCCTCGACGGCGCCGCGG CGGACGAGTGA
Upstream 100 bases:
>100_bases CCGACAGCTACTGGGGCCACGAGTGGATGTGGATGCGGGAGATGAAGCAGGCGCAGCAGGAGGCCGCCGCGCAGACCGCC GAGCCGCGGGAAGTGGCGTC
Downstream 100 bases:
>100_bases GGGGTGACCGAGATGGGCGCACAGCGACGGTCCGATCTGCACCCCGACGTGGCGGCGATGCTCGCGGCACTGGAGTCGTT CCCGGATGTCACCCGCTACG
Product: putative monooxygenase
Products: NA
Alternate protein names: PAMO; Baeyer-Villiger monooxygenase; BVMO [H]
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSTEFDAVVVGAGISGLYAVYKLRQRGMRVRGFESAEGLGGTWYHNRYPGARCDVESIDYSYSFDEELQQEWTWSERFAT QEEILRYLEHVADRHDLRSAYEFSTRVTAAVFDEQTARWTVSTDTGRTVTARYCVLATGVLSATNKPDIPGRDSFGGELY HTGEWPHEPVRFAGKRVGVIGTGSSGIQAIPVIAEEAAQVVVFQRSPNYSIPAGNRRLDPEFVAEVKANYAERRRLSRIS GGGTPNSPYPKGALEVDEAERRRIYDQWWQRGGYLFAKAFPDQTTNPAANDTAREYVEAKIREMVADPEIAEQLIPTDHP IGTKRIVTDTGYFQTYNRDNVTLVNLRRTPIEEITATGVRTSGGSYELDMLIFATGFDAMTGSLLRIDIRGRGGRELRQE WAAGPRTYLGLAVAGFPNMFILAGPGSPSVLANMVLVAEQHVDWIARCLDHLDEHNVTTIEAGAEAVDQWVAECNTKAAA TLFPQANSWYLGANIPGKPRVFMPYIGGFGNYSQICDEVAAAGYKGFVLDGAAADE
Sequences:
>Translated_536_residues MSTEFDAVVVGAGISGLYAVYKLRQRGMRVRGFESAEGLGGTWYHNRYPGARCDVESIDYSYSFDEELQQEWTWSERFAT QEEILRYLEHVADRHDLRSAYEFSTRVTAAVFDEQTARWTVSTDTGRTVTARYCVLATGVLSATNKPDIPGRDSFGGELY HTGEWPHEPVRFAGKRVGVIGTGSSGIQAIPVIAEEAAQVVVFQRSPNYSIPAGNRRLDPEFVAEVKANYAERRRLSRIS GGGTPNSPYPKGALEVDEAERRRIYDQWWQRGGYLFAKAFPDQTTNPAANDTAREYVEAKIREMVADPEIAEQLIPTDHP IGTKRIVTDTGYFQTYNRDNVTLVNLRRTPIEEITATGVRTSGGSYELDMLIFATGFDAMTGSLLRIDIRGRGGRELRQE WAAGPRTYLGLAVAGFPNMFILAGPGSPSVLANMVLVAEQHVDWIARCLDHLDEHNVTTIEAGAEAVDQWVAECNTKAAA TLFPQANSWYLGANIPGKPRVFMPYIGGFGNYSQICDEVAAAGYKGFVLDGAAADE >Mature_535_residues STEFDAVVVGAGISGLYAVYKLRQRGMRVRGFESAEGLGGTWYHNRYPGARCDVESIDYSYSFDEELQQEWTWSERFATQ EEILRYLEHVADRHDLRSAYEFSTRVTAAVFDEQTARWTVSTDTGRTVTARYCVLATGVLSATNKPDIPGRDSFGGELYH TGEWPHEPVRFAGKRVGVIGTGSSGIQAIPVIAEEAAQVVVFQRSPNYSIPAGNRRLDPEFVAEVKANYAERRRLSRISG GGTPNSPYPKGALEVDEAERRRIYDQWWQRGGYLFAKAFPDQTTNPAANDTAREYVEAKIREMVADPEIAEQLIPTDHPI GTKRIVTDTGYFQTYNRDNVTLVNLRRTPIEEITATGVRTSGGSYELDMLIFATGFDAMTGSLLRIDIRGRGGRELRQEW AAGPRTYLGLAVAGFPNMFILAGPGSPSVLANMVLVAEQHVDWIARCLDHLDEHNVTTIEAGAEAVDQWVAECNTKAAAT LFPQANSWYLGANIPGKPRVFMPYIGGFGNYSQICDEVAAAGYKGFVLDGAAADE
Specific function: Catalyzes a Baeyer-Villiger oxidation reaction, i.e., the insertion of an oxygen atom into a carbon-carbon bond adjacent to a carbonyl, which converts ketones to esters. Is most efficient with phenylacetone as substrate, leading to the formation of benzyl
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503757, Length=210, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: =1.14.13.92 [H]
Molecular weight: Translated: 59266; Mature: 59135
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEFDAVVVGAGISGLYAVYKLRQRGMRVRGFESAEGLGGTWYHNRYPGARCDVESIDY CCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCC SYSFDEELQQEWTWSERFATQEEILRYLEHVADRHDLRSAYEFSTRVTAAVFDEQTARWT CCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEE VSTDTGRTVTARYCVLATGVLSATNKPDIPGRDSFGGELYHTGEWPHEPVRFAGKRVGVI EECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCEEEEE GTGSSGIQAIPVIAEEAAQVVVFQRSPNYSIPAGNRRLDPEFVAEVKANYAERRRLSRIS ECCCCCCEEEHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GGGTPNSPYPKGALEVDEAERRRIYDQWWQRGGYLFAKAFPDQTTNPAANDTAREYVEAK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH IREMVADPEIAEQLIPTDHPIGTKRIVTDTGYFQTYNRDNVTLVNLRRTPIEEITATGVR HHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCHHHHHHCCEE TSGGSYELDMLIFATGFDAMTGSLLRIDIRGRGGRELRQEWAAGPRTYLGLAVAGFPNMF CCCCCEEEEEEEEEECCHHHCCCEEEEEECCCCCHHHHHHHCCCCCHHEEEEEECCCCEE ILAGPGSPSVLANMVLVAEQHVDWIARCLDHLDEHNVTTIEAGAEAVDQWVAECNTKAAA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCEE TLFPQANSWYLGANIPGKPRVFMPYIGGFGNYSQICDEVAAAGYKGFVLDGAAADE EECCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure STEFDAVVVGAGISGLYAVYKLRQRGMRVRGFESAEGLGGTWYHNRYPGARCDVESIDY CCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCC SYSFDEELQQEWTWSERFATQEEILRYLEHVADRHDLRSAYEFSTRVTAAVFDEQTARWT CCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEE VSTDTGRTVTARYCVLATGVLSATNKPDIPGRDSFGGELYHTGEWPHEPVRFAGKRVGVI EECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCEEEEE GTGSSGIQAIPVIAEEAAQVVVFQRSPNYSIPAGNRRLDPEFVAEVKANYAERRRLSRIS ECCCCCCEEEHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GGGTPNSPYPKGALEVDEAERRRIYDQWWQRGGYLFAKAFPDQTTNPAANDTAREYVEAK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH IREMVADPEIAEQLIPTDHPIGTKRIVTDTGYFQTYNRDNVTLVNLRRTPIEEITATGVR HHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCHHHHHHCCEE TSGGSYELDMLIFATGFDAMTGSLLRIDIRGRGGRELRQEWAAGPRTYLGLAVAGFPNMF CCCCCEEEEEEEEEECCHHHCCCEEEEEECCCCCHHHHHHHCCCCCHHEEEEEECCCCEE ILAGPGSPSVLANMVLVAEQHVDWIARCLDHLDEHNVTTIEAGAEAVDQWVAECNTKAAA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCEE TLFPQANSWYLGANIPGKPRVFMPYIGGFGNYSQICDEVAAAGYKGFVLDGAAADE EECCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA