Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025677

Identifier: 54025677

GI number: 54025677

Start: 3921283

End: 3922329

Strand: Reverse

Name: 54025677

Synonym: nfa37070

Alternate gene names: NA

Gene position: 3922329-3921283 (Counterclockwise)

Preceding gene: 54025678

Following gene: 54025676

Centisome position: 65.14

GC content: 73.07

Gene sequence:

>1047_bases
ATGATCACCTTCTCCGCGACCACGGTTCTCGTCCTTGCGCTGATCGCGGCCGTCGTGCTGGCCGTCGGCGTGTGGGCCTA
CTCCACGGCCAATCGGCTCGACCGGCTGCACGTGCGCTCGGACCTGTCCTGGCAGGCGCTGGAAGCCGCGCTGGCACGGC
GGGCGGTGGTGGCGCGCTCGGTGGCCATGGCGATCGCCGGACCGGTCTCCGATCCCGCCCTCGCCGATCAGGCCCGCCGA
CTGGCGGCCCTGGCGGACCGCGCCGAGCGTGCCGGCCGGGCCGAGCGGGAGACCGTGGAGAACCAGCTCGCCGCGGCCCT
GTCGACCGTGGACATCGGATTGCTCCGCCCGCAGCTGGTCGCCGAACTCGCCGACGCGGAGGCGCGGGTGCTGATCGCGC
GGCGCTTCCACAACGACGCCGTGCGCGACACGCTCGCGCTGCGCACCCGCCGCCCGGTGCGGTGGCTGCACCTGGGCGGC
ACCGCCCCGTTGCCCACCTACTTCGAGATCACCGAGCGGGCCACCCCCGCCGCGTCGACCGGGCTGGCCGTCGACACCAT
CCGCACCTCGTCGCGGGTGGTTCTGCTCGACGAACGCGACCGCGTGCTGCTCATGCGCGGCAACGACCCCAAGACCCCGG
ACGTCTCGTTCTGGTTCACCATCGGCGGCGGCGTGGAACCGGGGGAGAGCCTGCGCGAGGCCGCGGTGCGGGAGCTGTGG
GAGGAGACCGGCTACACCGCCGACCCGGCCGCGCTGCGCGGGCCGATCTGGCGGCGGGTGGCGGTGTTCCCCTTCGACGG
CGAGCTGATCCGCGCCGAGGAGCTGTTCTTCACCCTGCGGGTGCCCGCGTACGAACCGAAACCGGGCAACCTCACCGCGG
TCGAGCGCCGCAGCATCACCGGACACAAGTGGTGCACGTCCGCCGACATCCTCGCCCTGGACGCCGCGGGGGAGACGGTC
TACCCCTACCACCTCGACGAGCTGCTGCCCGAGGCGGCCGAAGTCGCTTCCGGCACTACGGATCCCGAGGTTCGCTCGAT
CCGCTGA

Upstream 100 bases:

>100_bases
ACCAGGTGGTGGGCGAATACGACTGGCCGGTGGTGGCCGAGCAGATCCTGCGCGTCTACGAAACCGTGACGGTCGGCGAC
ACCCGGGTACGGGCGGCCGG

Downstream 100 bases:

>100_bases
CCGCGCCCTCACCGGTGTGATCCGGCTCACGAGCATGCTAGGTTCGGACTGGAATGCGGCACGGACGGGTAGCCCTCCCG
AACGTGCCCGCGCAATCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Mutator MutT Protein; MutT/Nudix-Family Hydrolase; MutT Protein; MutT/NUDIX Family Hydrolase; Hydrolase Nudix Family Protein; Conserved Membrane Protein; ADP-Ribose Pyrophosphatase; MutT DNA Repair Protein; Nudix Hydrolase; Nudix Superfamily Hydrolase; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MITFSATTVLVLALIAAVVLAVGVWAYSTANRLDRLHVRSDLSWQALEAALARRAVVARSVAMAIAGPVSDPALADQARR
LAALADRAERAGRAERETVENQLAAALSTVDIGLLRPQLVAELADAEARVLIARRFHNDAVRDTLALRTRRPVRWLHLGG
TAPLPTYFEITERATPAASTGLAVDTIRTSSRVVLLDERDRVLLMRGNDPKTPDVSFWFTIGGGVEPGESLREAAVRELW
EETGYTADPAALRGPIWRRVAVFPFDGELIRAEELFFTLRVPAYEPKPGNLTAVERRSITGHKWCTSADILALDAAGETV
YPYHLDELLPEAAEVASGTTDPEVRSIR

Sequences:

>Translated_348_residues
MITFSATTVLVLALIAAVVLAVGVWAYSTANRLDRLHVRSDLSWQALEAALARRAVVARSVAMAIAGPVSDPALADQARR
LAALADRAERAGRAERETVENQLAAALSTVDIGLLRPQLVAELADAEARVLIARRFHNDAVRDTLALRTRRPVRWLHLGG
TAPLPTYFEITERATPAASTGLAVDTIRTSSRVVLLDERDRVLLMRGNDPKTPDVSFWFTIGGGVEPGESLREAAVRELW
EETGYTADPAALRGPIWRRVAVFPFDGELIRAEELFFTLRVPAYEPKPGNLTAVERRSITGHKWCTSADILALDAAGETV
YPYHLDELLPEAAEVASGTTDPEVRSIR
>Mature_348_residues
MITFSATTVLVLALIAAVVLAVGVWAYSTANRLDRLHVRSDLSWQALEAALARRAVVARSVAMAIAGPVSDPALADQARR
LAALADRAERAGRAERETVENQLAAALSTVDIGLLRPQLVAELADAEARVLIARRFHNDAVRDTLALRTRRPVRWLHLGG
TAPLPTYFEITERATPAASTGLAVDTIRTSSRVVLLDERDRVLLMRGNDPKTPDVSFWFTIGGGVEPGESLREAAVRELW
EETGYTADPAALRGPIWRRVAVFPFDGELIRAEELFFTLRVPAYEPKPGNLTAVERRSITGHKWCTSADILALDAAGETV
YPYHLDELLPEAAEVASGTTDPEVRSIR

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37985; Mature: 37985

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFSATTVLVLALIAAVVLAVGVWAYSTANRLDRLHVRSDLSWQALEAALARRAVVARS
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VAMAIAGPVSDPALADQARRLAALADRAERAGRAERETVENQLAAALSTVDIGLLRPQLV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELADAEARVLIARRFHNDAVRDTLALRTRRPVRWLHLGGTAPLPTYFEITERATPAAST
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCC
GLAVDTIRTSSRVVLLDERDRVLLMRGNDPKTPDVSFWFTIGGGVEPGESLREAAVRELW
CCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
EETGYTADPAALRGPIWRRVAVFPFDGELIRAEELFFTLRVPAYEPKPGNLTAVERRSIT
HHCCCCCCCHHHCCCHHHEEEEECCCCCEEEHEEEEEEEECCCCCCCCCCEEEEECCCCC
GHKWCTSADILALDAAGETVYPYHLDELLPEAAEVASGTTDPEVRSIR
CCCCCCCCCEEEEECCCCEECCCCHHHHCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MITFSATTVLVLALIAAVVLAVGVWAYSTANRLDRLHVRSDLSWQALEAALARRAVVARS
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VAMAIAGPVSDPALADQARRLAALADRAERAGRAERETVENQLAAALSTVDIGLLRPQLV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELADAEARVLIARRFHNDAVRDTLALRTRRPVRWLHLGGTAPLPTYFEITERATPAAST
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCC
GLAVDTIRTSSRVVLLDERDRVLLMRGNDPKTPDVSFWFTIGGGVEPGESLREAAVRELW
CCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
EETGYTADPAALRGPIWRRVAVFPFDGELIRAEELFFTLRVPAYEPKPGNLTAVERRSIT
HHCCCCCCCHHHCCCHHHEEEEECCCCCEEEHEEEEEEEECCCCCCCCCCEEEEECCCCC
GHKWCTSADILALDAAGETVYPYHLDELLPEAAEVASGTTDPEVRSIR
CCCCCCCCCEEEEECCCCEECCCCHHHHCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA