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The map label for this gene is yqjI [C]

Identifier: 54025581

GI number: 54025581

Start: 3821554

End: 3822192

Strand: Reverse

Name: yqjI [C]

Synonym: nfa36110

Alternate gene names: 54025581

Gene position: 3822192-3821554 (Counterclockwise)

Preceding gene: 54025582

Following gene: 54025580

Centisome position: 63.48

GC content: 71.21

Gene sequence:

>639_bases
ATGGAACACGAACATCACCACCGCCGTCGCGGCTTCGGCCGCGGACCGCACGGTTTCGACCCGGAACGCCACCCGCATCG
CCGGGGTCCGCGCCACGGTTTCGGTCCGGAATTCGGACCCGGCCACGGTTTCGGACCGGGCTTCGGTCCGCACATCGGCC
GGGGTCGCGGACGCGGCGGCCGTGGCCGCCGCGGCGACGTCCGCGCGGCCGTGCTGCTGCTGCTCACCGAGCGGCCGATG
CACGGCTACGAACTCATCCAGCAGATCCGCGAGCGCAGCGACGACATCTGGCGGCCGAGCCCCGGATCGATCTACCCCGC
TCTGGCGCAACTGGAGGACGAGGGCCTTGTCCTCATCGACAAGGTCGCCGGCCGCAAGACCGCCAAGCTGACCGAGGCGG
GCACCGCCTATGTGACCGAACACCGCGACGAACTCGGCGACCCGTGGGCCGATGTCAAGAACGACGTCGGCGCCCAGGCC
ATCGACCTGCGGGCGTTGGTCGGTCAGCTGATGGGTGCGGTCGCCCAGGTCGCCGCCGTCGGTACCCCCGAGCAGGCGGG
CAAGGCGGCCGAGGTGCTCACCGAGGCCCGCAGGTCGCTGTATCGCATCCTCGCCGAGGACGACGCACCCGAATCGTGA

Upstream 100 bases:

>100_bases
GAACAGAACCGAGGAATACTGTCGGCATTCCTTGCGTTAGATGCATTGACGATATATCGTCGATAACATGAAGTACACAC
GAGAGCCTCAGGAGGCCGAC

Downstream 100 bases:

>100_bases
CCGATCGGTAGTGCTCGTTCGAGATGCGCGACGGGCGCGGCCGGGGAGATCATTGTGAGGTGCGACAAAAGTTCGAGCGG
CGGAGTCGGGGCGGGTCACA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator Padr-Like Family; Transcriptional Regulator-Like Protein; Transcriptional Regulator PadR Family; Padr Family Transcriptional Regulator; PadR-Like Transcriptional Regulatory Protein; Transcriptional Regulator Protein; ParR Family Transcriptional Regulator; PadR Transcriptional Regulator PadR-Like Family; Transcriptional Regulator Padr Family; Transcriptional Regulator PadR-Like

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MEHEHHHRRRGFGRGPHGFDPERHPHRRGPRHGFGPEFGPGHGFGPGFGPHIGRGRGRGGRGRRGDVRAAVLLLLTERPM
HGYELIQQIRERSDDIWRPSPGSIYPALAQLEDEGLVLIDKVAGRKTAKLTEAGTAYVTEHRDELGDPWADVKNDVGAQA
IDLRALVGQLMGAVAQVAAVGTPEQAGKAAEVLTEARRSLYRILAEDDAPES

Sequences:

>Translated_212_residues
MEHEHHHRRRGFGRGPHGFDPERHPHRRGPRHGFGPEFGPGHGFGPGFGPHIGRGRGRGGRGRRGDVRAAVLLLLTERPM
HGYELIQQIRERSDDIWRPSPGSIYPALAQLEDEGLVLIDKVAGRKTAKLTEAGTAYVTEHRDELGDPWADVKNDVGAQA
IDLRALVGQLMGAVAQVAAVGTPEQAGKAAEVLTEARRSLYRILAEDDAPES
>Mature_212_residues
MEHEHHHRRRGFGRGPHGFDPERHPHRRGPRHGFGPEFGPGHGFGPGFGPHIGRGRGRGGRGRRGDVRAAVLLLLTERPM
HGYELIQQIRERSDDIWRPSPGSIYPALAQLEDEGLVLIDKVAGRKTAKLTEAGTAYVTEHRDELGDPWADVKNDVGAQA
IDLRALVGQLMGAVAQVAAVGTPEQAGKAAEVLTEARRSLYRILAEDDAPES

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=82, Percent_Identity=36.5853658536585, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23164; Mature: 23164

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHEHHHRRRGFGRGPHGFDPERHPHRRGPRHGFGPEFGPGHGFGPGFGPHIGRGRGRGG
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGRRGDVRAAVLLLLTERPMHGYELIQQIRERSDDIWRPSPGSIYPALAQLEDEGLVLID
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEE
KVAGRKTAKLTEAGTAYVTEHRDELGDPWADVKNDVGAQAIDLRALVGQLMGAVAQVAAV
CCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GTPEQAGKAAEVLTEARRSLYRILAEDDAPES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEHEHHHRRRGFGRGPHGFDPERHPHRRGPRHGFGPEFGPGHGFGPGFGPHIGRGRGRGG
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGRRGDVRAAVLLLLTERPMHGYELIQQIRERSDDIWRPSPGSIYPALAQLEDEGLVLID
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEE
KVAGRKTAKLTEAGTAYVTEHRDELGDPWADVKNDVGAQAIDLRALVGQLMGAVAQVAAV
CCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GTPEQAGKAAEVLTEARRSLYRILAEDDAPES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA