Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025515

Identifier: 54025515

GI number: 54025515

Start: 3757280

End: 3758341

Strand: Reverse

Name: 54025515

Synonym: nfa35450

Alternate gene names: NA

Gene position: 3758341-3757280 (Counterclockwise)

Preceding gene: 54025516

Following gene: 54025514

Centisome position: 62.42

GC content: 70.34

Gene sequence:

>1062_bases
ATGCCCTCGTCCTCGACGAGCCTGGTGACCGAACCGGATCTCCGCGCCCTGCGCGACTATCTGGCGACGGCGCTCGACGA
CGGAATCGCCGGGGAACTGACCGCGTCGCTGATCGGCGGCGGCCGGTCGAACCCCACCTACTTGATCACCGACGACGCGC
GGACCTGGGTGCTGCGGCGCCCGCCCTACGGGCACGTGCTGCCCAGCGCGCACGACATGGGCCGCGAGTTCACCGTGCTC
TCGGCCCTGTGCGACTCGCCGGTCCCGGTACCGCGCCCGGTGCACCTGTGCCGCGACACCGAGGTGCTCGGTGCGCCGTT
CTACCTGATGGAGCACGTGGTCGGCCGCTCGGTCGGCACTCCCGAGGACGCCGCCGAACTCACCGTGCCGCAACGTCGTT
CGCTCGGGTTCGAATTCGCCGACACGCTCGCCGCACTCCACGACGTCGACGTCGACCGGGTCGGGCTGGCCGATTTCGGC
AGACCCGACGGCTATCTCGAGCGTCAGCTCGAGCGCTGGGCGCGGCAGTGGCGCGCCTCCGCGACCCGCGAGCGGCCCGA
GGTCGAGCTGCTGCTCGACACACTGGGCCGATCCATCCCGGTGACGCGCTTCCCCGGCATCGTGCACGGTGACGTCAAGC
TCGACAACGTCCTGGTCTCGCCGCAGGACCCGACCCTGATCGTGGCGGTGCTCGACTGGGAGATGGCCACGCTCGGCGAC
ACCTTCGCCGACGTGGGGATCCTGCTCAGTTTCTGGGACGTGCCCGGTGTGCCCGTCAATCCGATCACCCGCGGCCTGAC
CGCGCTCGAGGGCTTTCCCACCCGAGCGGAACTGCTCGGCCGCTATGCCGAACAGCGCGGCGTCGAACTGTCCGACATCG
AGTGGTACGCCGTCTTCGCCGACCTCAAGATCGCGGTGATCCTCGAAGGCATCAACGCCAGACACCGACAGGGCGAGACC
GTCGGCGACGGTTTCGACGGCGTCGCCGACATGGTCGGCCCGCTTTTGCGCCGCGCGCTGGATCTGGCCGCCGCCTCCGA
CCTTCCCGGGCCGCGGCGCTGA

Upstream 100 bases:

>100_bases
GGACTATTCGCTCGGTGTTGACACATATCGTGTTCTGGGTCACTATGTGTTCGCCCGAACGATCGTTCGGGACTCGCCGC
CGATGAAAGAGGATCGTCCT

Downstream 100 bases:

>100_bases
CACGCCCCGGCGAATCGAAAGAACCCCCATGGATTTCGCATACAGCCACACCGTCGAACAGCTCCGGGCTCAGCTCGTCA
CGTTCCTCCAGGACGTCGTG

Product: putative phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MPSSSTSLVTEPDLRALRDYLATALDDGIAGELTASLIGGGRSNPTYLITDDARTWVLRRPPYGHVLPSAHDMGREFTVL
SALCDSPVPVPRPVHLCRDTEVLGAPFYLMEHVVGRSVGTPEDAAELTVPQRRSLGFEFADTLAALHDVDVDRVGLADFG
RPDGYLERQLERWARQWRASATRERPEVELLLDTLGRSIPVTRFPGIVHGDVKLDNVLVSPQDPTLIVAVLDWEMATLGD
TFADVGILLSFWDVPGVPVNPITRGLTALEGFPTRAELLGRYAEQRGVELSDIEWYAVFADLKIAVILEGINARHRQGET
VGDGFDGVADMVGPLLRRALDLAAASDLPGPRR

Sequences:

>Translated_353_residues
MPSSSTSLVTEPDLRALRDYLATALDDGIAGELTASLIGGGRSNPTYLITDDARTWVLRRPPYGHVLPSAHDMGREFTVL
SALCDSPVPVPRPVHLCRDTEVLGAPFYLMEHVVGRSVGTPEDAAELTVPQRRSLGFEFADTLAALHDVDVDRVGLADFG
RPDGYLERQLERWARQWRASATRERPEVELLLDTLGRSIPVTRFPGIVHGDVKLDNVLVSPQDPTLIVAVLDWEMATLGD
TFADVGILLSFWDVPGVPVNPITRGLTALEGFPTRAELLGRYAEQRGVELSDIEWYAVFADLKIAVILEGINARHRQGET
VGDGFDGVADMVGPLLRRALDLAAASDLPGPRR
>Mature_352_residues
PSSSTSLVTEPDLRALRDYLATALDDGIAGELTASLIGGGRSNPTYLITDDARTWVLRRPPYGHVLPSAHDMGREFTVLS
ALCDSPVPVPRPVHLCRDTEVLGAPFYLMEHVVGRSVGTPEDAAELTVPQRRSLGFEFADTLAALHDVDVDRVGLADFGR
PDGYLERQLERWARQWRASATRERPEVELLLDTLGRSIPVTRFPGIVHGDVKLDNVLVSPQDPTLIVAVLDWEMATLGDT
FADVGILLSFWDVPGVPVNPITRGLTALEGFPTRAELLGRYAEQRGVELSDIEWYAVFADLKIAVILEGINARHRQGETV
GDGFDGVADMVGPLLRRALDLAAASDLPGPRR

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48976061, Length=333, Percent_Identity=34.8348348348348, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI211971008, Length=333, Percent_Identity=34.8348348348348, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI38505218, Length=345, Percent_Identity=32.463768115942, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17562446, Length=309, Percent_Identity=35.9223300970874, Blast_Score=175, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38543; Mature: 38412

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00108 PROTEIN_KINASE_ST

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSSTSLVTEPDLRALRDYLATALDDGIAGELTASLIGGGRSNPTYLITDDARTWVLRR
CCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEC
PPYGHVLPSAHDMGREFTVLSALCDSPVPVPRPVHLCRDTEVLGAPFYLMEHVVGRSVGT
CCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHCCCCC
PEDAAELTVPQRRSLGFEFADTLAALHDVDVDRVGLADFGRPDGYLERQLERWARQWRAS
CCCHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
ATRERPEVELLLDTLGRSIPVTRFPGIVHGDVKLDNVLVSPQDPTLIVAVLDWEMATLGD
HHCCCCHHHHHHHHHCCCCCCHHCCCEEECCEEECEEEECCCCCEEEEEEECCHHHHHHH
TFADVGILLSFWDVPGVPVNPITRGLTALEGFPTRAELLGRYAEQRGVELSDIEWYAVFA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCEEEEEEE
DLKIAVILEGINARHRQGETVGDGFDGVADMVGPLLRRALDLAAASDLPGPRR
CCEEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PSSSTSLVTEPDLRALRDYLATALDDGIAGELTASLIGGGRSNPTYLITDDARTWVLRR
CCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEC
PPYGHVLPSAHDMGREFTVLSALCDSPVPVPRPVHLCRDTEVLGAPFYLMEHVVGRSVGT
CCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHCCCCC
PEDAAELTVPQRRSLGFEFADTLAALHDVDVDRVGLADFGRPDGYLERQLERWARQWRAS
CCCHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
ATRERPEVELLLDTLGRSIPVTRFPGIVHGDVKLDNVLVSPQDPTLIVAVLDWEMATLGD
HHCCCCHHHHHHHHHCCCCCCHHCCCEEECCEEECEEEECCCCCEEEEEEECCHHHHHHH
TFADVGILLSFWDVPGVPVNPITRGLTALEGFPTRAELLGRYAEQRGVELSDIEWYAVFA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCEEEEEEE
DLKIAVILEGINARHRQGETVGDGFDGVADMVGPLLRRALDLAAASDLPGPRR
CCEEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA