Click here to switch to the map view.

The map label for this gene is 54020643

Identifier: 54020643

GI number: 54020643

Start: 834768

End: 835451

Strand: Reverse

Name: 54020643

Synonym: mhp662

Alternate gene names: NA

Gene position: 835451-834768 (Counterclockwise)

Preceding gene: 54020644

Following gene: 54020642

Centisome position: 93.58

GC content: 24.42

Gene sequence:

>684_bases
ATGAAAACCAGGTATAAAAAATTGGTTTTAGAATTTCAAGGTAAATTTTACACAATTTTTCTTGATTATTCACCCAAATT
TTCTAAAATTATAATAAAAATGGTTGATGATTTTATTTTGGTTCGTTCAAATCCGGCAGTAAAACTTGAGGAACTAATAA
AAATAGTTAAAAATTCTAATTTTTTTCAAAAAGTAGTGAAAATTTTGCCAAAACGTGTTATACTTAATTTTTCTGAGTCT
AGTTTTTATCTTTTTGGCAAAAAATACTACTATAATTTAGTCAAAACGCAAAATAAACTTTTTTTACAAGCTGAAAATTT
AGTTTTCTCCCTAACAAGAGCGCGAAATTTAGAAGCCAAAATTCAAAAAGTTTTAATGAATTTTTTTTTAAATTATCTAA
AAAAAAGGACAAATTATTGAGCTCAAATTTTAGAAATTCCCAACTATGAAATCAAAATAGCGCGTAAAAATGCTGCCTGG
GGAACAAATTATCGTCGAAAAAAAATTCATTATAGCTATTTTTTACTTCCTTTTTCTAAAAAAATCATTGATTATGTTAT
TGTCCATGAACTTGTGCACCATTTTTTTAGCAAGCATAATAAACTTTTTTGGGAAAAAGTAGCTGAAATTATTCCTAATT
ATAAGGAATTAATTAGAAAATTAAATGATTATGAACTTAATTAA

Upstream 100 bases:

>100_bases
ATTTTAGGAGATAAAATTTATTTTAGGTCACCTTTATATAGTTTAGAATTCGAAATAATTAGTAAAAATGCCAACAACAT
TGAAGTAAAAATAACCAAAA

Downstream 100 bases:

>100_bases
TAAAAAAAATTTAAATATCTATCTTTGCGGGCCAACAGTTTATAGCGATGTTCATATTGGAAATTTAAGAACTATAATTA
TTTTTGATGCTATTTTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKTRYKKLVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVKILPKRVILNFSES
SFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMNFFLNYLKKRTNYWAQILEIPNYEIKIARKNAAW
GTNYRRKKIHYSYFLLPFSKKIIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN

Sequences:

>Translated_227_residues
MKTRYKKLVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVKILPKRVILNFSES
SFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMNFFLNYLKKRTNY*AQILEIPNYEIKIARKNAAW
GTNYRRKKIHYSYFLLPFSKKIIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN
>Mature_227_residues
MKTRYKKLVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVKILPKRVILNFSES
SFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMNFFLNYLKKRTNY*AQILEIPNYEIKIARKNAAW
GTNYRRKKIHYSYFLLPFSKKIIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27363; Mature: 27363

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRYKKLVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSN
CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCH
FFQKVVKILPKRVILNFSESSFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAK
HHHHHHHHCCHHHEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHH
IQKVLMNFFLNYLKKRTNYAQILEIPNYEIKIARKNAAWGTNYRRKKIHYSYFLLPFSKK
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEEEEEHHHHH
IIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTRYKKLVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSN
CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCH
FFQKVVKILPKRVILNFSESSFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAK
HHHHHHHHCCHHHEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHH
IQKVLMNFFLNYLKKRTNYAQILEIPNYEIKIARKNAAWGTNYRRKKIHYSYFLLPFSKK
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEEEEEHHHHH
IIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA